RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.92	□□□□□ -1.62
ATM-223	ENST00000533979	FAM169A	Q9Y6X4	670 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	CUL7	Q14999	1698 aa		4.92	□□□□□ -1.62
ATM-223	ENST00000533979	SETBP1	Q9Y6X0	1596 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	KIAA0556	O60303	1618 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	TBX10	O75333	385 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	HEXIM1	O94992	359 aa	Known RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	ENO1	P06733	434 aa	Known RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	SNHG28	P0DPA3	235 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	TBXAS1	P24557	533 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	NFKBIA	P25963	317 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	HOXA7	P31268	230 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	IDUA	P35475	653 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	IGHMBP2	P38935	993 aa	Known RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	GPD2	P43304	727 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	ZNF84	P51523	738 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	PSMC6	P62333	389 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	RBP5	P82980	135 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	B4GALNT1	Q00973	533 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	FHL1	Q13642	323 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	SMC1A	Q14683	1233 aa	Known RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	BMP2KL	Q5H9B9	411 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	TMEM196	Q5HYL7	178 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	PLEKHS1	Q5SXH7	462 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	DENND5B	Q6ZUT9	1274 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	FAM57B	Q71RH2	274 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	TFAP2D	Q7Z6R9	452 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	HSCB	Q8IWL3	235 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	UEVLD	Q8IX04	471 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	CNTROB	Q8N137	903 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	NAT8L	Q8N9F0	302 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	SLC2A12	Q8TD20	617 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	CELF1	Q92879	486 aa	Known RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	TBC1D31	Q96DN5	1066 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	ZNF845	Q96IR2	970 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	ANP32E	Q9BTT0	268 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	NDST4	Q9H3R1	872 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	TRPV4	Q9HBA0	871 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	MLXIPL	Q9NP71	852 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	BEX4	Q9NWD9	120 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	RASAL2	Q9UJF2	1139 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	BAG5	Q9UL15	447 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM-223	ENST00000533979	VPS4A	Q9UN37	437 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	ZBTB1	Q9Y2K1	713 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979	CARMIL1	Q5VZK9	1371 aa		4.91	□□□□□ -1.62
ATM-223	ENST00000533979		A0A1W2PQ09	198 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	GXYLT2	A0PJZ3	443 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	GAGE10	A6NGK3	116 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	C2CD4B	A6NLJ0	364 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	IKBKB	O14920	756 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	PRPF4	O43172	522 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	AFP	P02771	609 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	SPARC	P09486	303 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	GCH1	P30793	250 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	ICAM3	P32942	547 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	ATP6V1E1	P36543	226 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	ARL1	P40616	181 aa	Predicted RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	PNPLA4	P41247	253 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	SLC12A2	P55011	1212 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	UBXN2A	P68543	259 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	RAE1	P78406	368 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	TFCP2	Q12800	502 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	AIMP1	Q12904	312 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	BFSP1	Q12934	665 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	MTX1	Q13505	466 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	LRRC24	Q50LG9	513 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	DNAJC21	Q5F1R6	531 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	GARNL3	Q5VVW2	1013 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	CCDC144NL	Q6NUI1	221 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	RBM44	Q6ZP01	1051 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	BHLHA9	Q7RTU4	235 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	ZDHHC17	Q8IUH5	632 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	LMNTD2	Q8IXW0	634 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	THNSL1	Q8IYQ7	743 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	FRMD1	Q8N878	549 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	OR52L2P	Q8NGH6	319 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	GLMP	Q8WWB7	406 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	NCSTN	Q92542	709 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	PIGK	Q92643	395 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	SECISBP2L	Q93073	1101 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	TRMT61A	Q96FX7	289 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	PPP1R10	Q96QC0	940 aa	Known RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	PAAF1	Q9BRP4	392 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	TTYH1	Q9H313	450 aa	Predicted RBP	4.9	□□□□□ -1.63
ATM-223	ENST00000533979	DECR2	Q9NUI1	292 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	KCND2	Q9NZV8	630 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	RCE1	Q9Y256	329 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	MAGI3	Q5TCQ9	1506 aa		4.9	□□□□□ -1.63
ATM-223	ENST00000533979	AKNA	Q7Z591	1439 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	LOC105369274	A0A096LPK9	316 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	LOC102723532	A0A0G2JNH3	316 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	FAM90A10P	A6NDY2	464 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	CD8B2	A6NJW9	211 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	LIPT2	A6NK58	231 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	FAM90A7P	A6NKC0	464 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	SH2D7	A6NKC9	451 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	FAM90A22P	A8MWA6	464 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	FAM90A12P	A8MX19	464 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms