RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TFE3P19532 575 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 PSMD8P48556 350 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 UBXN2AP68543 259 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ITGADQ13349 1161 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 PLEKHG6Q3KR16 790 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 THEM5Q8N1Q8 247 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CARNMT1Q8N4J0 409 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SLC16A10Q8TF71 515 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 KBTBD7Q8WVZ9 684 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 HNRNPABQ99729 332 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 CCDC32Q9BV29 185 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 EMILIN2Q9BXX0 1053 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 PDZD7Q9H5P4 517 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 TRPV5Q9NQA5 729 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 RPRD1BQ9NQG5 326 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 LMCD1Q9NZU5 365 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 AKAP7Q9P0M2 348 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 ING4Q9UNL4 249 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SNX9Q9Y5X1 595 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 TEX264Q9Y6I9 313 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 A0A1W2PQ67 120 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 FADS2P1A8MWK0 482 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ZNF99A8MXY4 864 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 RIMBP2O15034 1052 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ADAMDEC1O15204 470 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 EPOP01588 193 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 NR2F6P10588 404 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ITGB5P18084 799 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 L1CAMP32004 1257 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 DSG3P32926 999 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 GMPRP36959 345 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CLDN10P78369 228 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ACAP2Q15057 778 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 BTBD8Q5XKL5 378 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CRYBG2Q8N1P7 616 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 TOP6BLQ8N6T0 577 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 TAMM41Q96BW9 452 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ERLEC1Q96DZ1 483 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 FCRL5Q96RD9 977 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SNRNP25Q9BV90 132 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 ZNF70Q9UC06 446 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 TMCC3Q9ULS5 477 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 GSTK1Q9Y2Q3 226 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CAPN14A8MX76 684 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 H3BNH8 94 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 SNAP23O00161 211 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 REM1O75628 298 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 ADRA1BP35368 520 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 GRM5P41594 1212 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 SNAP25P60880 206 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 INCA1Q0VD86 236 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 BAATQ14032 418 aaPredicted RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 STARD3Q14849 445 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 ATP6AP1Q15904 470 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 LSM12Q3MHD2 195 aaKnown RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 PKN3Q6P5Z2 889 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 FAM35AQ86V20 835 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 CYP4Z1Q86W10 505 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 TCAIMQ8N3R3 496 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 FIBCD1Q8N539 461 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 DCLK2Q8N568 766 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 ASCC1Q8N9N2 400 aaKnown RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 UBE2E3Q969T4 207 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 MROQ9BYG7 248 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 TFB2MQ9H5Q4 396 aaKnown RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 KIF17Q9P2E2 1029 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.07□□□□□ -1.76
SOX6-217ENST00000533870 ERGIC3Q9Y282 383 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 ZNF510Q9Y2H8 683 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 TTLL3Q9Y4R7 772 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 NEMP1O14524 444 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 RAD51BO15315 384 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 NDUFS3O75489 264 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 RFPL1O75677 317 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 DHFRP00374 187 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 SERPINF2P08697 491 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 BMP1P13497 986 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 YBX3P16989 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
SOX6-217ENST00000533870 CYP3A5P20815 502 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 GLDCP23378 1020 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 CCNCP24863 283 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 ALDH3A2P51648 485 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 ATP1A4Q13733 1029 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 PLA2G4EQ3MJ16 856 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 ATP13A4Q4VNC1 1196 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 TEX44Q53QW1 395 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 VARS2Q5ST30 1063 aaKnown RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 TRAF7Q6Q0C0 670 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 GADL1Q6ZQY3 521 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 TAB3Q8N5C8 712 aaPredicted RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 GLMNQ92990 594 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 FAM162AQ96A26 154 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 SERAC1Q96JX3 654 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 CDK5RAP1Q96SZ6 601 aaKnown RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 DPY30Q9C005 99 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 RPAP3Q9H6T3 665 aaPredicted RBP4.07□□□□□ -1.76
SOX6-217ENST00000533870 ING3Q9NXR8 418 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 NPAP1Q9NZP6 1156 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 SLC13A4Q9UKG4 626 aa4.07□□□□□ -1.76
SOX6-217ENST00000533870 TRAF6Q9Y4K3 522 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms