RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 DCP2Q8IU60 420 aaKnown RBP11.47□□□□□ -0.57
CLCF1-202ENST00000533438 UMODL1-AS1Q8N2C9 162 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 OR4C6Q8NH72 309 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 CASKIN2Q8WXE0 1202 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 ASB12Q8WXK4 309 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 RFFLQ8WZ73 363 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 HMCESQ96FZ2 354 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 KLHL32Q96NJ5 620 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 EPAS1Q99814 870 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 OSBPL1AQ9BXW6 950 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 CATSPERBQ9H7T0 1116 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 CAAP1Q9H8G2 361 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 ITM2BQ9Y287 266 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 APC2O95996 2303 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 ACACAQ13085 2346 aa11.47□□□□□ -0.57
CLCF1-202ENST00000533438 COL27A1Q8IZC6 1860 aaPredicted RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 KNTC1P50748 2209 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 SPTY2D1-AS1A0A0U1RR47 76 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 IGLON5A6NGN9 336 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 RASA4BC9J798 803 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 AREL1O15033 823 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 FGF10O15520 208 aaPredicted RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 RASA4O43374 803 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 BUB1O43683 1085 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 PTMAP06454 111 aaKnown RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 JUPP14923 745 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 TNFAIP3P21580 790 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 HTR7P34969 479 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 PFN3P60673 137 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 MAMLD1Q13495 774 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 FZD2Q14332 565 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 TSR1Q2NL82 804 aaKnown RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 PARP15Q460N3 678 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 HES3Q5TGS1 186 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 E4F1Q66K89 784 aaPredicted RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 PPP1R2P3Q6NXS1 205 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 DCUN1D2Q6PH85 259 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 GDPD4Q6W3E5 623 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 PTAR1Q7Z6K3 402 aaPredicted RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 ZNF354CQ86Y25 554 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 LRRC8AQ8IWT6 810 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 CACTIN-AS1Q8N1I8 211 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 RYBPQ8N488 228 aaPredicted RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 ARFGAP1Q8N6T3 406 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 LSM14AQ8ND56 463 aaKnown RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 DENND6BQ8NEG7 585 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 ARHGEF26Q96DR7 871 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 GDAP1L1Q96MZ0 367 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 CPEB1Q9BZB8 566 aaKnown RBP11.46□□□□□ -0.57
CLCF1-202ENST00000533438 LRRC19Q9H756 370 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 RAXQ9Y2V3 346 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 MFHAS1Q9Y4C4 1052 aa11.46□□□□□ -0.57
CLCF1-202ENST00000533438 LRP4O75096 1905 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 LY6G6EA0A0G2JKS1 128 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 FPGTO14772 594 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 ATMINO43313 823 aaPredicted RBP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 IGSF6O95976 241 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 CSF2P04141 144 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 NME1P15531 152 aaKnown RBP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 PRKCIP41743 596 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 RABIFP47224 123 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 HNRNPKP61978 463 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 TARDBPQ13148 414 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 SGCGQ13326 291 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 CYTH1Q15438 398 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 TPRG1LQ5T0D9 272 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 CYP4V2Q6ZWL3 525 aaPredicted RBP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 PARGQ86W56 976 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 DNAAF5Q86Y56 855 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 NETO2Q8NC67 525 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 CCDC112Q8NEF3 446 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 HNRNPLLQ8WVV9 542 aaKnown RBP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 CENPTQ96BT3 561 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 PEBP4Q96S96 227 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 HAUS4Q9H6D7 363 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 PDFQ9HBH1 243 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 PARVAQ9NVD7 372 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 ZNHIT6Q9NWK9 470 aaKnown RBP11.45□□□□□ -0.58
CLCF1-202ENST00000533438 GPATCH2LQ9NWQ4 482 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 NLGN3Q9NZ94 848 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 DKK3Q9UBP4 350 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 LHX3Q9UBR4 397 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 KLF15Q9UIH9 416 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 AP4E1Q9UPM8 1137 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 U3KQA8 63 aa11.45□□□□□ -0.58
CLCF1-202ENST00000533438 NEMP2A6NFY4 417 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 TMEM191CA6NGB0 347 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 TMCO5BA8MYB1 307 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 EIF3CLB5ME19 914 aaKnown RBP11.44□□□□□ -0.58
CLCF1-202ENST00000533438 NEMP1O14524 444 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 SCAMP1O15126 338 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 FFAR2O15552 330 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 SERPING1P05155 500 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 CKMT1AP12532 417 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 GZMAP12544 262 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 DESP17661 470 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 PSMA2P25787 234 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 NDST2P52849 883 aa11.44□□□□□ -0.58
CLCF1-202ENST00000533438 TPI1P60174 286 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms