RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SPINT1O43278 529 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 MFSD11O43934 449 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 DFNA5O60443 496 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 BUB1BO60566 1050 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-210ENST00000532935 MAFKO60675 156 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 PEX11BO96011 259 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 TIMP2P16035 220 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 HNRNPA2B1P22626 353 aaKnown RBP15.54■□□□□ 0.08
CPSF1-210ENST00000532935 AKT2P31751 481 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 CYLC1P35663 651 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-210ENST00000532935 CCT8P50990 548 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 RENBPP51606 427 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 NXPH1P58417 271 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 NSUN2Q08J23 767 aaKnown RBP eCLIP15.54■□□□□ 0.08
CPSF1-210ENST00000532935 SLC10A7Q0GE19 358 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 OVGP1Q12889 678 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 FGL2Q14314 439 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 PAFAH1B3Q15102 231 aaKnown RBP15.54■□□□□ 0.08
CPSF1-210ENST00000532935 LRRC73Q5JTD7 316 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 NCBP2-AS2Q69YL0 99 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 ZSCAN30Q86W11 494 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 HCAR2Q8TDS4 363 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 RAPGEF5Q92565 580 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 FAF2Q96CS3 445 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 ZNF641Q96N77 438 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-210ENST00000532935 CAMK1GQ96NX5 476 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 PSKH2Q96QS6 385 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 TUBGCP5Q96RT8 1024 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 SLC17A9Q9BYT1 436 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 SUV39H2Q9H5I1 410 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 FZD3Q9NPG1 666 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 GDF3Q9NR23 364 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 PCDHA13Q9Y5I0 950 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 SPEGQ15772 3267 aa15.54■□□□□ 0.08
CPSF1-210ENST00000532935 A0A1B0GTQ1 180 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 TSPAN11A1L157 253 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 IGLON5A6NGN9 336 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 MUSKO15146 869 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 MAGEC1O60732 1142 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 FECHP22830 423 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 KDELR1P24390 212 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 SLC1A1P43005 524 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 ZNF235Q14590 738 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 SPA17Q15506 151 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 DBX2Q6ZNG2 339 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 CAMK1DQ8IU85 385 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 TMTC1Q8IUR5 882 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 LRRC49Q8IUZ0 686 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 KLHDC7BQ96G42 594 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 ELF4Q99607 663 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-210ENST00000532935 C1QTNF2Q9BXJ5 285 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 ATP13A3Q9H7F0 1226 aa15.53■□□□□ 0.08
CPSF1-210ENST00000532935 SPAARA0A1B0GVQ0 90 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SOWAHDA6NJG2 315 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 FLRT2O43155 660 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 PCDHGA12O60330 932 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 PAK4O96013 591 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 ITIH2P19823 946 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 XPAP23025 273 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SERPINA4P29622 427 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 HSPA9P38646 679 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 NOP2P46087 812 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SCNN1BP51168 640 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SUOXP51687 545 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 HADHBP55084 474 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 FAM193AP78312 1265 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 IL9RQ01113 521 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 GALNT2Q10471 571 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SGCGQ13326 291 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 HNRNPDQ14103 355 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SUZ12Q15022 739 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 PRAMEF14Q5SWL7 426 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 CFAP58Q5T655 872 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 BRAT1Q6PJG6 821 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 GCNT7Q6ZNI0 430 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SPATS2Q86XZ4 545 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 BBS5Q8N3I7 341 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 PGBD5Q8N414 524 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 PQLC3Q8N755 202 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 SETD7Q8WTS6 366 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 NSMCE1Q8WV22 266 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 RNF157Q96PX1 679 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 ERVMER34-1Q9H9K5 563 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 LUC7LQ9NQ29 371 aaKnown RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 PCOLCE2Q9UKZ9 415 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 TFR2Q9UP52 801 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 HYOU1Q9Y4L1 999 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 HS3ST3A1Q9Y663 406 aa15.52■□□□□ 0.08
CPSF1-210ENST00000532935 EPN1Q9Y6I3 576 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-210ENST00000532935 LRRD1A4D1F6 860 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 ZNF487B1APH4 448 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 RAD51BO15315 384 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 SPOPO43791 374 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 CBFA2T3O75081 653 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 NDUFA10O95299 355 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 MAP3K6O95382 1288 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 THEGLP0DJG4 465 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 COMTP21964 271 aa15.51■□□□□ 0.07
CPSF1-210ENST00000532935 GARSP41250 739 aaKnown RBP15.51■□□□□ 0.07
CPSF1-210ENST00000532935 CLDN2P57739 230 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms