RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 MIPP30301 263 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 TPI1P60174 286 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 RHOAP61586 193 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 FZD2Q14332 565 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 ZNF542PQ5EBM4 170 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 AFMIDQ63HM1 303 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 PPP1R2P3Q6NXS1 205 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 GDPD4Q6W3E5 623 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 KYAT3Q6YP21 454 aaKnown RBP19.19■□□□□ 0.66
SSH3-209ENST00000532600 ZNF354CQ86Y25 554 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 ARHGAP12Q8IWW6 846 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 GALNT15Q8N3T1 639 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 NPWQ8N729 165 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 SPC24Q8NBT2 197 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 FNIP1Q8TF40 1166 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 CASKIN2Q8WXE0 1202 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 RAB7BQ96AH8 199 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 EXOC2Q96KP1 924 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 GDAP1L1Q96MZ0 367 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 LENG8Q96PV6 779 aaPredicted RBP19.19■□□□□ 0.66
SSH3-209ENST00000532600 OSBPL1AQ9BXW6 950 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 SLC39A8Q9C0K1 460 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 ISCUQ9H1K1 167 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 DHX35Q9H5Z1 703 aaKnown RBP19.19■□□□□ 0.66
SSH3-209ENST00000532600 KLF15Q9UIH9 416 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 LAMA5O15230 3695 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 APC2O95996 2303 aa19.19■□□□□ 0.66
SSH3-209ENST00000532600 A6NNZ2 444 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 EEF2KO00418 725 aaKnown RBP19.18■□□□□ 0.66
SSH3-209ENST00000532600 LRCH4O75427 683 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 RFPL3O75679 317 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 PIAS2O75928 621 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 TCF4P15884 667 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 TIMP2P16035 220 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 HTR7P34969 479 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 ERMARDQ5T6L9 678 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 PTAR1Q7Z6K3 402 aaPredicted RBP19.18■□□□□ 0.66
SSH3-209ENST00000532600 TP53INP2Q8IXH6 220 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 ZNF653Q96CK0 615 aa19.18■□□□□ 0.66
SSH3-209ENST00000532600 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.18■□□□□ 0.66
SSH3-209ENST00000532600 LRRK1Q38SD2 2015 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 TRABD2BA6NFA1 517 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 BUB1BO60566 1050 aaPredicted RBP19.17■□□□□ 0.66
SSH3-209ENST00000532600 PRAMEF11O60813 436 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 PIGNO95427 931 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 IGSF6O95976 241 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 IL1R2P27930 398 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 RGRP47804 291 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 PAPOLAP51003 745 aaKnown RBP19.17■□□□□ 0.66
SSH3-209ENST00000532600 NDST2P52849 883 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 ARHGAP36Q6ZRI8 547 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 RFX8Q6ZV50 586 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 ASB12Q8WXK4 309 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 CENPTQ96BT3 561 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 NSMCE3Q96MG7 304 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 CCDC86Q9H6F5 360 aaKnown RBP19.17■□□□□ 0.66
SSH3-209ENST00000532600 MYO1AQ9UBC5 1043 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 DKK3Q9UBP4 350 aa19.17■□□□□ 0.66
SSH3-209ENST00000532600 UBA2Q9UBT2 640 aaPredicted RBP19.17■□□□□ 0.66
SSH3-209ENST00000532600 PNMA8BQ9ULN7 279 aaPredicted RBP19.17■□□□□ 0.66
SSH3-209ENST00000532600 CELSR3Q9NYQ7 3312 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 LY6G6EA0A0G2JKS1 128 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 SPTY2D1-AS1A0A0U1RR47 76 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 SSU72P8A0A1W2PR75 194 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 FFAR2O15552 330 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 MMP20O60882 483 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 C1SP09871 688 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 CKMT2P17540 419 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 ERCC2P18074 760 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 FECHP22830 423 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 IGFALSP35858 605 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 PFN3P60673 137 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 ZNF211Q13398 564 aaPredicted RBP19.16■□□□□ 0.66
SSH3-209ENST00000532600 DPYSQ14117 519 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 TTC7BQ86TV6 843 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 TMPRSS12Q86WS5 348 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 ZSWIM9Q86XI8 627 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 OR4C6Q8NH72 309 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 IFT43Q96FT9 208 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 CPEB1Q9BZB8 566 aaKnown RBP19.16■□□□□ 0.66
SSH3-209ENST00000532600 NHEJ1Q9H9Q4 299 aaPredicted RBP19.16■□□□□ 0.66
SSH3-209ENST00000532600 ZNHIT6Q9NWK9 470 aaKnown RBP19.16■□□□□ 0.66
SSH3-209ENST00000532600 CWC15Q9P013 229 aaKnown RBP19.16■□□□□ 0.66
SSH3-209ENST00000532600 U3KQA8 63 aa19.16■□□□□ 0.66
SSH3-209ENST00000532600 MYLKQ15746 1914 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 TSPAN11A1L157 253 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 EIF3CLB5ME19 914 aaKnown RBP19.15■□□□□ 0.66
SSH3-209ENST00000532600 MYF5P13349 255 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 ACP1P24666 158 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 EIF2B5Q13144 721 aaKnown RBP19.15■□□□□ 0.66
SSH3-209ENST00000532600 SGCGQ13326 291 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 TXNRD3NBQ6F5E7 133 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 ZSCAN30Q86W11 494 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 FAM174AQ8TBP5 190 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 PANX2Q96RD6 677 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 EIF3CQ99613 913 aaKnown RBP19.15■□□□□ 0.66
SSH3-209ENST00000532600 MBNL1Q9NR56 388 aaKnown RBP19.15■□□□□ 0.66
SSH3-209ENST00000532600 DNAJC28Q9NX36 388 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 DKK4Q9UBT3 224 aa19.15■□□□□ 0.66
SSH3-209ENST00000532600 FAM208BQ5VWN6 2430 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms