RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 KLC2Q9H0B6 622 aa21.16■□□□□ 0.98
SMPD1-204ENST00000530395 PARVAQ9NVD7 372 aa21.16■□□□□ 0.98
SMPD1-204ENST00000530395 DKK3Q9UBP4 350 aa21.16■□□□□ 0.98
SMPD1-204ENST00000530395 UBA2Q9UBT2 640 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-204ENST00000530395 BAHCC1Q9P281 2608 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 RRP8O43159 456 aaKnown RBP21.15■□□□□ 0.98
SMPD1-204ENST00000530395 AQP9O43315 295 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 NEBLO76041 1014 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 TM7SF2O76062 418 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 SUOXP51687 545 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 PFN3P60673 137 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 GRM3Q14832 879 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 LRRC73Q5JTD7 316 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 IRF2BP2Q7Z5L9 587 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 VPS36Q86VN1 386 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 VOPP1Q96AW1 172 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 DEPDC7Q96QD5 511 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 CPEB1Q9BZB8 566 aaKnown RBP21.15■□□□□ 0.98
SMPD1-204ENST00000530395 ABCG4Q9H172 646 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 CAAP1Q9H8G2 361 aa21.15■□□□□ 0.98
SMPD1-204ENST00000530395 TMCO5BA8MYB1 307 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 EIF3CLB5ME19 914 aaKnown RBP21.14■□□□□ 0.97
SMPD1-204ENST00000530395 TOR1BO14657 336 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 OPA1O60313 960 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 MMP20O60882 483 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 PSMA2P25787 234 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 ACTN2P35609 894 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 NDST2P52849 883 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 YPEL5P62699 121 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 ELP6Q0PNE2 266 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 FILIP1LQ4L180 1135 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 CFAP58Q5T655 872 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 DNAAF5Q86Y56 855 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 LMX1AQ8TE12 382 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 CENPTQ96BT3 561 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 EXOC2Q96KP1 924 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 EIF3CQ99613 913 aaKnown RBP21.14■□□□□ 0.97
SMPD1-204ENST00000530395 IL12RB2Q99665 862 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 SPASTQ9UBP0 616 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 LHX3Q9UBR4 397 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 AP4E1Q9UPM8 1137 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 LRRK1Q38SD2 2015 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 ANKRD36A6QL64 1941 aa21.14■□□□□ 0.97
SMPD1-204ENST00000530395 EEF2KO00418 725 aaKnown RBP21.13■□□□□ 0.97
SMPD1-204ENST00000530395 TLX3O43711 291 aaPredicted RBP21.13■□□□□ 0.97
SMPD1-204ENST00000530395 BRINP1O60477 761 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 IGFALSP35858 605 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 EIF2S3P41091 472 aaKnown RBP21.13■□□□□ 0.97
SMPD1-204ENST00000530395 OGDHQ02218 1023 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 MAMLD1Q13495 774 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 ASIC2Q16515 512 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 ANO6Q4KMQ2 910 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 TPRG1LQ5T0D9 272 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 NETO2Q8NC67 525 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 SNIP1Q8TAD8 396 aaKnown RBP21.13■□□□□ 0.97
SMPD1-204ENST00000530395 IFI44Q8TCB0 444 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 MAPK15Q8TD08 544 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 HCAR2Q8TDS4 363 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 BPIFA3Q9BQP9 254 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 SYT11Q9BT88 431 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 WRAP53Q9BUR4 548 aaKnown RBP21.13■□□□□ 0.97
SMPD1-204ENST00000530395 LRRC19Q9H756 370 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 RTN4Q9NQC3 1192 aaKnown RBP21.13■□□□□ 0.97
SMPD1-204ENST00000530395 TAS2R14Q9NYV8 317 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 APOBEC3BQ9UH17 382 aaKnown RBP21.13■□□□□ 0.97
SMPD1-204ENST00000530395 KLF15Q9UIH9 416 aa21.13■□□□□ 0.97
SMPD1-204ENST00000530395 LY6G6EA0A0G2JKS1 128 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 ARHGAP42A6NI28 874 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 LRRC53A6NM62 1247 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 SMTNL1A8MU46 457 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 TPP1O14773 563 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 INSIG1O15503 277 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 TEX33O43247 280 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 DAPK3O43293 454 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 PIGNO95427 931 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 MYF5P13349 255 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 TIMP2P16035 220 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 EIF2B5Q13144 721 aaKnown RBP21.12■□□□□ 0.97
SMPD1-204ENST00000530395 COL9A2Q14055 689 aaPredicted RBP21.12■□□□□ 0.97
SMPD1-204ENST00000530395 CYTH1Q15438 398 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 KLHL40Q2TBA0 621 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 CDCP2Q5VXM1 449 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 PLEKHA7Q6IQ23 1121 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 MACC1Q6ZN28 852 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 FGF11Q92914 225 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 GLMNQ92990 594 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 SLC13A1Q9BZW2 595 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 DHX35Q9H5Z1 703 aaKnown RBP21.12■□□□□ 0.97
SMPD1-204ENST00000530395 GPATCH2LQ9NWQ4 482 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 SALL4Q9UJQ4 1053 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 U3KQA8 63 aa21.12■□□□□ 0.97
SMPD1-204ENST00000530395 ATMINO43313 823 aaPredicted RBP21.11■□□□□ 0.97
SMPD1-204ENST00000530395 PRAMEF11O60813 436 aa21.11■□□□□ 0.97
SMPD1-204ENST00000530395 RNF8O76064 485 aa21.11■□□□□ 0.97
SMPD1-204ENST00000530395 DEFB133Q30KQ1 61 aa21.11■□□□□ 0.97
SMPD1-204ENST00000530395 TMEM52BQ4KMG9 183 aa21.11■□□□□ 0.97
SMPD1-204ENST00000530395 ERMARDQ5T6L9 678 aa21.11■□□□□ 0.97
SMPD1-204ENST00000530395 ERAP2Q6P179 960 aa21.11■□□□□ 0.97
SMPD1-204ENST00000530395 PHACTR4Q8IZ21 702 aa21.11■□□□□ 0.97
SMPD1-204ENST00000530395 TP53I13Q8NBR0 393 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms