RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PRKCHP24723 683 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 STK19P49842 368 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 DRG2P55039 364 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 SATB1Q01826 763 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 CDK18Q07002 472 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 WASHC5Q12768 1159 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 ILF2Q12905 390 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 MORF4L2Q15014 288 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 SIX1Q15475 284 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TPSAB1Q15661 275 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 CST6Q15828 149 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TMEM31Q5JXX7 168 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 NCEH1Q6PIU2 408 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 ARHGAP36Q6ZRI8 547 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 ERN2Q76MJ5 926 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 CCNJLQ8IV13 435 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 C1orf210Q8IVY1 113 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 KLHL7Q8IXQ5 586 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 IFT20Q8IY31 132 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 MMGT1Q8N4V1 131 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 CCDC33Q8N5R6 958 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TSEN2Q8NCE0 465 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 PIP4K2CQ8TBX8 421 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 SORCS1Q8WY21 1168 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 ATG4AQ8WYN0 398 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 PEX13Q92968 403 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 RMDN1Q96DB5 314 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 SNF8Q96H20 258 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 MYO19Q96H55 970 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 NAT9Q9BTE0 207 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 FOXQ1Q9C009 403 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 DDX47Q9H0S4 455 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 L2HGDHQ9H9P8 463 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 XAB2Q9HCS7 855 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 PREBQ9HCU5 417 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 RAB6BQ9NRW1 208 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 FAM114A2Q9NRY5 505 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 LHX3Q9UBR4 397 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 MTRF1LQ9UGC7 380 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 PPM1HQ9ULR3 514 aa8.01□□□□□ -1.13
SSBP3-211ENST00000528787 R3HDM2Q9Y2K5 976 aaKnown RBP8.01□□□□□ -1.13
SSBP3-211ENST00000528787 TCRBV7S2A1N4TA0A589 114 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 TSPAN11A1L157 253 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 MAGEB16A2A368 324 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 RGSL1A5PLK6 1076 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 EFCAB8A8MWE9 144 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 PSMD11O00231 422 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 AXIN1O15169 862 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 PFDN6O15212 129 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 HTRA2O43464 458 aaPredicted RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 NDUFS2O75306 463 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 LEFTY1O75610 366 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 MAP3K6O95382 1288 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 SLU7O95391 586 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 CRTAMO95727 393 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 AP2A1O95782 977 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 CD160O95971 181 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 CPP00450 1065 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 IGLV3-19P01714 112 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 MLNP12872 115 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 VAV1P15498 845 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 NFKB1P19838 968 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 SLC8A1P32418 973 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 CD86P42081 329 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 BASP1P80723 227 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 CDH17Q12864 832 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 GPS1Q13098 491 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 MTAPQ13126 283 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 SEMA5AQ13591 1074 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 ARHGEF7Q14155 803 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 DNAJC21Q5F1R6 531 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 ARSIQ5FYB1 569 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 KIAA1161Q6NSJ0 714 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 KIAA1324Q6UXG2 1013 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 RABEPKQ7Z6M1 372 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 TTC7BQ86TV6 843 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 RASSF3Q86WH2 238 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 JAMLQ86YT9 394 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 MMAAQ8IVH4 418 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 PPIL6Q8IXY8 311 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 PDIK1LQ8N165 341 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 STK40Q8N2I9 435 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 EIF1ADQ8N9N8 165 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 DNAAF3Q8N9W5 541 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 DTWD2Q8NBA8 298 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 GRIN3AQ8TCU5 1115 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 PDCD6IPQ8WUM4 868 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 PTCD2Q8WV60 388 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 FOXJ1Q92949 421 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 SKA1Q96BD8 255 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 KRT12Q99456 494 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 MLPHQ9BV36 600 aaPredicted RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 TDRD1Q9BXT4 1180 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 PHACTR1Q9C0D0 580 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 BTBD1Q9H0C5 482 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 TNKS2Q9H2K2 1166 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 PABPC3Q9H361 631 aaKnown RBP8□□□□□ -1.13
SSBP3-211ENST00000528787 NOD2Q9HC29 1040 aa8□□□□□ -1.13
SSBP3-211ENST00000528787 ITM2CQ9NQX7 267 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms