RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 CYP2U1Q7Z449 544 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 ZC3H18Q86VM9 953 aaKnown RBP17.98■□□□□ 0.47
NXF1-206ENST00000527902 CNTD1Q8N815 330 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 TRIM58Q8NG06 486 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 ACTL9Q8TC94 416 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 RUBCNQ92622 972 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 BIRC7Q96CA5 298 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 TUBGCP5Q96RT8 1024 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 FAM118BQ9BPY3 351 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 ORAI3Q9BRQ5 295 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 PCED1AQ9H1Q7 454 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 C10orf88Q9H8K7 445 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 EBF2Q9HAK2 575 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 GGT7Q9UJ14 662 aa17.98■□□□□ 0.47
NXF1-206ENST00000527902 TSPAN11A1L157 253 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 LRRC72A6NJI9 287 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 MEI4A8MW99 385 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 TRAFD1O14545 582 aaPredicted RBP17.97■□□□□ 0.47
NXF1-206ENST00000527902 ZSCAN12O43309 604 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 FSBPO95073 299 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 ITIH2P19823 946 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 OTUD4Q01804 1114 aaKnown RBP17.97■□□□□ 0.47
NXF1-206ENST00000527902 DSC2Q02487 901 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 NIPAL4Q0D2K0 466 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 SPEM2Q0P670 501 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 PLA2G2CQ5R387 149 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 PEAR1Q5VY43 1037 aaPredicted RBP17.97■□□□□ 0.47
NXF1-206ENST00000527902 FBXL19Q6PCT2 694 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 BBS5Q8N3I7 341 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.97■□□□□ 0.47
NXF1-206ENST00000527902 ARRDC2Q8TBH0 407 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 TFB1MQ8WVM0 346 aaKnown RBP17.97■□□□□ 0.47
NXF1-206ENST00000527902 DNASE2BQ8WZ79 361 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 PIGKQ92643 395 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 FOXJ1Q92949 421 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 QKIQ96PU8 341 aaKnown RBP eCLIP17.97■□□□□ 0.47
NXF1-206ENST00000527902 SEMA3CQ99985 751 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 BRD8Q9H0E9 1235 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 SUV39H2Q9H5I1 410 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 ATP13A3Q9H7F0 1226 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 SCUBE2Q9NQ36 999 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 DKK3Q9UBP4 350 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 PILRBQ9UKJ0 227 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 ITM2BQ9Y287 266 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 ATP8A1Q9Y2Q0 1164 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 PCDHGA5Q9Y5G8 931 aa17.97■□□□□ 0.47
NXF1-206ENST00000527902 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3DA0A087WVF3 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3IA0A087WXS9 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3EA0A087X179 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3KA0A087X1G2 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3FA6NER0 549 aaPredicted RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 PATE3B3GLJ2 98 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3LB9A6J9 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3HP0C7X1 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TIMP2P16035 220 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 SERPINA4P29622 427 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 CETN2P41208 172 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 WASHC5Q12768 1159 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TRAF2Q12933 501 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 GRM3Q14832 879 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3GQ6DHY5 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3CQ6IPX1 549 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 BZW1Q7L1Q6 419 aaKnown RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 ALYREFQ86V81 257 aaKnown RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 TBC1D3Q8IZP1 549 aaPredicted RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 C1orf216Q8TAB5 229 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 SNX19Q92543 992 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 ECHDC3Q96DC8 303 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 ZNF641Q96N77 438 aaPredicted RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 POLR1EQ9GZS1 481 aaKnown RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 KDM4CQ9H3R0 1056 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 SEPT10Q9P0V9 454 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 AMACRQ9UHK6 382 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 EIF2B4Q9UI10 523 aaKnown RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 R3HDM2Q9Y2K5 976 aaKnown RBP17.96■□□□□ 0.47
NXF1-206ENST00000527902 TTLL3Q9Y4R7 772 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 PCDHGC4Q9Y5F7 938 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 FADS3Q9Y5Q0 445 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 PCDH15Q96QU1 1955 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 KNL1Q8NG31 2342 aa17.96■□□□□ 0.47
NXF1-206ENST00000527902 KCNK3O14649 394 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 AREL1O15033 823 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 TJP3O95049 919 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 PRKCGP05129 697 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 PTPN3P26045 913 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 MAPK8P45983 427 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 BCL2L1Q07817 233 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 ITKQ08881 620 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 CCDC181Q5TID7 509 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 TCEAL6Q6IPX3 200 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 SYT12Q8IV01 421 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 RGL4Q8IZJ4 473 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 UBE2Q2Q8WVN8 375 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 TCEAL3Q969E4 200 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 HINFPQ9BQA5 517 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 PREBQ9HCU5 417 aa17.95■□□□□ 0.46
NXF1-206ENST00000527902 ZFR2Q9UPR6 939 aaKnown RBP17.95■□□□□ 0.46
NXF1-206ENST00000527902 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.94■□□□□ 0.46
NXF1-206ENST00000527902 ENC1O14682 589 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms