RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 UBA2Q9UBT2 640 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-212ENST00000527887 IPO11Q9UI26 975 aaKnown RBP14.38□□□□□ -0.11
CAPN1-212ENST00000527887 LHX6Q9UPM6 363 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 SCINQ9Y6U3 715 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 TMEM131Q92545 1883 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 A0A1B0GTH6 734 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 TMEM191CA6NGB0 347 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 TM7SF2O76062 418 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 FTLP02792 175 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-212ENST00000527887 GP1BAP07359 652 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 MYBL1P10243 752 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 NME1P15531 152 aaKnown RBP14.37□□□□□ -0.11
CAPN1-212ENST00000527887 CSNK1DP48730 415 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 HCAR3P49019 387 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 ELP6Q0PNE2 266 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 TARDBPQ13148 414 aaKnown RBP eCLIP14.37□□□□□ -0.11
CAPN1-212ENST00000527887 FZD2Q14332 565 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 RTP5Q14D33 572 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 ATXN7L2Q5T6C5 722 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-212ENST00000527887 HES3Q5TGS1 186 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 LEKR1Q6ZMV7 388 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 CXorf40AQ8TE69 158 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 CENPTQ96BT3 561 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 TBATAQ96M53 351 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 ZNF641Q96N77 438 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-212ENST00000527887 HAUS4Q9H6D7 363 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 DNAJC28Q9NX36 388 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 TAS2R14Q9NYV8 317 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 AP4E1Q9UPM8 1137 aa14.37□□□□□ -0.11
CAPN1-212ENST00000527887 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
CAPN1-212ENST00000527887 KNTC1P50748 2209 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 A0A087WV48 116 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 TPP1O14773 563 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 RAD51BO15315 384 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 DAPK3O43293 454 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 PRPSAP2O60256 369 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 PRAMEF11O60813 436 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 TIMP2P16035 220 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 XPAP23025 273 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-212ENST00000527887 CDC25BP30305 580 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 OGDHQ02218 1023 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 KLHL30Q0D2K2 578 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 RFTN1Q14699 578 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-212ENST00000527887 NR1I3Q14994 352 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 CYTH1Q15438 398 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 BRAT1Q6PJG6 821 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 ZNF571Q7Z3V5 609 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-212ENST00000527887 LZTR1Q8N653 840 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 DCBLD1Q8N8Z6 715 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 TUBGCP5Q96RT8 1024 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 KLC2Q9H0B6 622 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 SUV39H2Q9H5I1 410 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 DHX35Q9H5Z1 703 aaKnown RBP14.36□□□□□ -0.11
CAPN1-212ENST00000527887 UCKL1Q9NWZ5 548 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 CLCA2Q9UQC9 943 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 RAXQ9Y2V3 346 aa14.36□□□□□ -0.11
CAPN1-212ENST00000527887 PLXNB3Q9ULL4 1909 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 ACACAQ13085 2346 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 TSPAN11A1L157 253 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 CFAP69A5D8W1 941 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 TMCO5BA8MYB1 307 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 K7ESM1 405 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 EEF2KO00418 725 aaKnown RBP14.35□□□□□ -0.11
CAPN1-212ENST00000527887 SERPINC1P01008 464 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 PCK1P35558 622 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 PEX5P50542 639 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 THOP1P52888 689 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 INSM1Q01101 510 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-212ENST00000527887 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
CAPN1-212ENST00000527887 PDE1CQ14123 709 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-212ENST00000527887 TMEM52BQ4KMG9 183 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 TMCO4Q5TGY1 634 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 ZCCHC8Q6NZY4 707 aaKnown RBP14.35□□□□□ -0.11
CAPN1-212ENST00000527887 RFX8Q6ZV50 586 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 MARCH9Q86YJ5 346 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 IQCDQ96DY2 449 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 MRFAP1L1Q96HT8 127 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 ISCUQ9H1K1 167 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 PDFQ9HBH1 243 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 SPASTQ9UBP0 616 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 LHX3Q9UBR4 397 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 CNOT8Q9UFF9 292 aaKnown RBP14.35□□□□□ -0.11
CAPN1-212ENST00000527887 APC2O95996 2303 aa14.35□□□□□ -0.11
CAPN1-212ENST00000527887 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.11
CAPN1-212ENST00000527887 FFAR2O15552 330 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 SPINT1O43278 529 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 AQP9O43315 295 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 MT-CO3P00414 261 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 JUNDP17535 347 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 MIPP30301 263 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 PAPOLAP51003 745 aaKnown RBP14.34□□□□□ -0.11
CAPN1-212ENST00000527887 BLKP51451 505 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 AGERQ15109 404 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 UGP2Q16851 508 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 BOLA3Q53S33 107 aa14.34□□□□□ -0.11
CAPN1-212ENST00000527887 CFAP58Q5T655 872 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms