RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 MAGEB16A2A368 324 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 SDR42E2A6NKP2 422 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 AGRPO00253 132 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 SASH3O75995 380 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 HLA-DRAP01903 254 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 CSF1RP07333 972 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 RARGP13631 454 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 ALADP13716 330 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 ETS2P15036 469 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 F8A1P23610 371 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 NPY2RP49146 381 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 CLK2P49760 499 aaKnown RBP7.3□□□□□ -1.24
CTNND1-216ENST00000527467 NEK3P51956 506 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 ELF3P78545 371 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-216ENST00000527467 CCDC58Q4VC31 144 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 SPDYCQ5MJ68 293 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 BRMS1LQ5PSV4 323 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 FNBP1LQ5T0N5 605 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 SPATA2LQ8IUW3 424 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-216ENST00000527467 FAM71DQ8N9W8 422 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 FNDC5Q8NAU1 212 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 TEX47Q8TBZ9 253 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 PYDC1Q8WXC3 89 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 PMM1Q92871 262 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 TMCO6Q96DC7 493 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 MSANTD3Q96H12 275 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 BTBD9Q96Q07 612 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 SPATC1LQ9H0A9 340 aa7.3□□□□□ -1.24
CTNND1-216ENST00000527467 RBAKQ9NYW8 714 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-216ENST00000527467 DRG1Q9Y295 367 aaKnown RBP7.3□□□□□ -1.24
CTNND1-216ENST00000527467 PLK4O00444 970 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 KIAA0391O15091 583 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 GPR182O15218 404 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 IPO13O94829 963 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 BMP7P18075 431 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 CD40LGP29965 261 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 CDC25CP30307 473 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 HNF4AP41235 474 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 GPR15P49685 360 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 BTG3Q14201 252 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 FRG1Q14331 258 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 MTF1Q14872 753 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 NAB2Q15742 525 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 CARTPTQ16568 116 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ATAD3CQ5T2N8 411 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ISLR2Q6UXK2 745 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ARHGAP36Q6ZRI8 547 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 GPR142Q7Z601 462 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ZBTB46Q86UZ6 589 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 SNX32Q86XE0 403 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 WDR49Q8IV35 697 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 RNF148Q8N7C7 305 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 TP53INP1Q96A56 240 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 MCEEQ96PE7 176 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 WDR18Q9BV38 432 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 CLPBQ9H078 707 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF700Q9H0M5 742 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 RSPH9Q9H1X1 276 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 LRMDAQ9H2I8 198 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 EXO5Q9H790 373 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ABCB9Q9NP78 766 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 FAM105AQ9NUU6 356 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 RDH8Q9NYR8 311 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 OAS3Q9Y6K5 1087 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 CLCA1A8K7I4 914 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 UPP2O95045 317 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 NFKB1P19838 968 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 CCR4P51679 360 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 RPL10AP62906 217 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 DMWDQ09019 674 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 C2orf76Q3KRA6 126 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 HSDL1Q3SXM5 330 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 TTMPQ5BVD1 217 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 QSOX2Q6ZRP7 698 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 FBXO36Q8NEA4 188 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF548Q8NEK5 533 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 SH3RF3Q8TEJ3 882 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ITFG2Q969R8 447 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 PTCD3Q96EY7 689 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 SHDQ96IW2 340 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 BBS4Q96RK4 519 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 GFM1Q96RP9 751 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 PAFAH2Q99487 392 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 KCNS3Q9BQ31 491 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 CCDC3Q9BQI4 270 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF232Q9UNY5 417 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 PEX16Q9Y5Y5 336 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 WDR19Q8NEZ3 1342 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 ARHGEF28Q8N1W1 1705 aaKnown RBP7.29□□□□□ -1.24
CTNND1-216ENST00000527467 PNMA6FA0A0J9YX94 578 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 IRF6O14896 467 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 MAGEB2O15479 319 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 NUAK1O60285 661 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 OR1I1O60431 355 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 FGFR3P22607 806 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 S100PP25815 95 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 S100A3P33764 101 aa7.29□□□□□ -1.24
CTNND1-216ENST00000527467 HPCAL1P37235 193 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms