RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 MAN2A1Q16706 1144 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 ZSCAN23Q3MJ62 389 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 MANEALQ5VSG8 457 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 TAF3Q5VWG9 929 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 RWDD4Q6NW29 188 aaKnown RBP16.32■□□□□ 0.2
PTPRU-210ENST00000527027 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 NLRP14Q86W24 1093 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 FSTL5Q8N475 847 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-210ENST00000527027 SCG3Q8WXD2 468 aaKnown RBP16.32■□□□□ 0.2
PTPRU-210ENST00000527027 LIN37Q96GY3 246 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-210ENST00000527027 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 CLMPQ9H6B4 373 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 SYNDIG1Q9H7V2 258 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 MBNL1Q9NR56 388 aaKnown RBP16.32■□□□□ 0.2
PTPRU-210ENST00000527027 TMEM248Q9NWD8 314 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 GULP1Q9UBP9 304 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 HECTD1Q9ULT8 2610 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 SPTA1P02549 2419 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 BOD1L1Q8NFC6 3051 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 TMX2-CTNND1H3BSU7 103 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 PLD2O14939 933 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 EFSO43281 561 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 BLKP51451 505 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 C1QBPQ07021 282 aaKnown RBP16.31■□□□□ 0.2
PTPRU-210ENST00000527027 EIF3IQ13347 325 aaKnown RBP16.31■□□□□ 0.2
PTPRU-210ENST00000527027 ELOCQ15369 112 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 KLHL40Q2TBA0 621 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 RAB6CQ53S08 254 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 LRRC73Q5JTD7 316 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 ATXN7L2Q5T6C5 722 aaPredicted RBP16.31■□□□□ 0.2
PTPRU-210ENST00000527027 LVRNQ6Q4G3 990 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 EMC1Q8N766 993 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 TP53I13Q8NBR0 393 aaPredicted RBP16.31■□□□□ 0.2
PTPRU-210ENST00000527027 CXorf40AQ8TE69 158 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 CPA5Q8WXQ8 436 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 EPAS1Q99814 870 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 RAB6CQ9H0N0 254 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 DOLKQ9UPQ8 538 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 PCDHGA7Q9Y5G6 932 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 DOCK4Q8N1I0 1966 aa16.31■□□□□ 0.2
PTPRU-210ENST00000527027 COL27A1Q8IZC6 1860 aaPredicted RBP16.31■□□□□ 0.2
PTPRU-210ENST00000527027 TMEM110-MUSTN1A8MSY1 372 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 FAM72CH0Y354 149 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 KDELR3O43731 214 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 SLC28A2O43868 658 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 RAMP2O60895 175 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 CELA2BP08218 269 aaPredicted RBP16.3■□□□□ 0.2
PTPRU-210ENST00000527027 ALPIP09923 528 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 ITIH2P19823 946 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 PEX5P50542 639 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 HK3P52790 923 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 RAD51Q06609 339 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 TPD52L1Q16890 204 aaPredicted RBP16.3■□□□□ 0.2
PTPRU-210ENST00000527027 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 FAM72AQ5TYM5 149 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 KLHDC7AQ5VTJ3 777 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 FAM72DQ6L9T8 149 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 RAB11FIP2Q7L804 512 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 NOP9Q86U38 636 aaKnown RBP16.3■□□□□ 0.2
PTPRU-210ENST00000527027 FAM72BQ86X60 149 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 SDR16C5Q8N3Y7 309 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 FBXO39Q8N4B4 442 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 ARL10Q8N8L6 244 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 MLKLQ8NB16 471 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 GFM1Q96RP9 751 aaKnown RBP16.3■□□□□ 0.2
PTPRU-210ENST00000527027 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 METTL5Q9NRN9 209 aaKnown RBP16.3■□□□□ 0.2
PTPRU-210ENST00000527027 ATXN7L1Q9ULK2 861 aaPredicted RBP16.3■□□□□ 0.2
PTPRU-210ENST00000527027 FHOD1Q9Y613 1164 aa16.3■□□□□ 0.2
PTPRU-210ENST00000527027 ZSCAN5CA6NGD5 496 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-210ENST00000527027 PYCARD-AS1I3L0S3 204 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 BUB1O43683 1085 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 LRIG2O94898 1065 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 WISP1O95388 367 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 GJB6O95452 261 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 MMEP08473 750 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 PLEKP08567 350 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-210ENST00000527027 CTSEP14091 401 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 TIMP2P16035 220 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 SLC5A2P31639 672 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 UGT1A5P35504 534 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 NOMO3P69849 1222 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 CCL7P80098 99 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 CAMK4Q16566 473 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 CDO1Q16878 200 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 C15orf59Q2T9L4 293 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-210ENST00000527027 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 MIIPQ5JXC2 388 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 NAA35Q5VZE5 725 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 B3GNT8Q7Z7M8 397 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 HID1Q8IV36 788 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 EXD3Q8N9H8 876 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 RXFP2Q8WXD0 754 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 CASKIN2Q8WXE0 1202 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 TBC1D31Q96DN5 1066 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 GDAP1L1Q96MZ0 367 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 WRAP53Q9BUR4 548 aaKnown RBP16.29■□□□□ 0.2
PTPRU-210ENST00000527027 NAA15Q9BXJ9 866 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms