RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 KCTD16Q68DU8 428 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 KIAA1161Q6NSJ0 714 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 ESRP1Q6NXG1 681 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 RAB11FIP2Q7L804 512 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 XYLT1Q86Y38 959 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 IRF2BP1Q8IU81 584 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 PCDH20Q8N6Y1 951 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 TMEM35BQ8NCS4 154 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 ZNF397Q8NF99 534 aaPredicted RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 TPCN2Q8NHX9 752 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 CXorf40AQ8TE69 158 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 RXFP2Q8WXD0 754 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 GLMNQ92990 594 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 CCDC74AQ96AQ1 378 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 CENPTQ96BT3 561 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 C1orf74Q96LT6 269 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 GFM1Q96RP9 751 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 CCNL2Q96S94 520 aaPredicted RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 LRRC61Q9BV99 259 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 CPEB1Q9BZB8 566 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 ZYG11BQ9C0D3 744 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 KLC2Q9H0B6 622 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 TMEM63CQ9P1W3 806 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 PCDHGC3Q9UN70 934 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 WDFY3Q8IZQ1 3526 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 TRPM6Q9BX84 2022 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 RP1P56715 2156 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 COL5A1P20908 1838 aaPredicted RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 IGLV3-10A0A075B6K4 115 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 A0A1W2PQM1 296 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 CDRT15L2A8MXV6 281 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 LMO7DNF2Z398 122 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 TPP1O14773 563 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 PLD2O14939 933 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 NOBOXO60393 691 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 RASGRP1O95267 797 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 PCCBP05166 539 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 MMEP08473 750 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 FAM87AP0C7U9 286 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 JMJD7P0C870 316 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 ADRA1BP35368 520 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 ETV5P41161 510 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 INHBCP55103 352 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 MARSP56192 900 aaKnown RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 SNRPD1P62314 119 aaKnown RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 PTK2BQ14289 1009 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 POLD3Q15054 466 aaPredicted RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 IRF4Q15306 451 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 MEA1Q16626 185 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 ALG11Q2TAA5 492 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 WSCD2Q2TBF2 565 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 AMZ1Q400G9 498 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 COLEC12Q5KU26 742 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 SCYL2Q6P3W7 929 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 GDPD4Q6W3E5 623 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 NOP9Q86U38 636 aaKnown RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 PTRH1Q86Y79 214 aaKnown RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 PYROXD2Q8N2H3 581 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 KYQ8NBH2 561 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 PCDH19Q8TAB3 1148 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 JOSD2Q8TAC2 188 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 SLC30A5Q8TAD4 765 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 BTN2A2Q8WVV5 523 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 ARHGEF2Q92974 986 aaKnown RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 USP7Q93009 1102 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 RNF31Q96EP0 1072 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 CCDC97Q96F63 343 aaPredicted RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 WBP1Q96G27 269 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 EXOC2Q96KP1 924 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 LENG8Q96PV6 779 aaPredicted RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 HAPLN3Q96S86 360 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 EPAS1Q99814 870 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 BPIFA3Q9BQP9 254 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 APOOQ9BUR5 198 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 BOCQ9BWV1 1114 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 CEP44Q9C0F1 390 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 USP29Q9HBJ7 922 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
CD44-221ENST00000526000 GPR27Q9NS67 375 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 RRN3Q9NYV6 651 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 ZNF212Q9UDV6 495 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 OR12D3Q9UGF7 316 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 IL17BQ9UHF5 180 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 RWDD2AQ9UIY3 292 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 HPCAL4Q9UM19 191 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 OR1A2Q9Y585 309 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 PCDHGA8Q9Y5G5 932 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 FHOD1Q9Y613 1164 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 LOC400499M0QZD8 3231 aa6.66□□□□□ -1.34
CD44-221ENST00000526000 SMG1Q96Q15 3661 aaKnown RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 PRAMEF33A0A0G2JMD5 474 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 NTN3O00634 580 aaPredicted RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 AREL1O15033 823 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 TEX33O43247 280 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 AP1G1O43747 822 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 LZTS3O60299 673 aaPredicted RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 PRAMEF10O60809 474 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 TMCC1O94876 653 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 LRIG2O94898 1065 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 PIGNO95427 931 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms