RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TANGO2Q6ICL3 276 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 PLEKHA7Q6IQ23 1121 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 PGBD2Q6P3X8 592 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 GJB7Q6PEY0 223 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 SYNE3Q6ZMZ3 975 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 RRAGAQ7L523 313 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 MON1AQ86VX9 555 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 CCDC105Q8IYK2 499 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 CIARTQ8N365 385 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-210ENST00000525878 WDSUB1Q8N9V3 476 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 RASSF8Q8NHQ8 419 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 NCSTNQ92542 709 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 RNF183Q96D59 192 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 KTI12Q96EK9 354 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-210ENST00000525878 TRAPPC9Q96Q05 1148 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 GFRA4Q9GZZ7 299 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 ZFP57Q9NU63 452 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 GEMIN8Q9NWZ8 242 aaKnown RBP4.12□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF224Q9NZL3 707 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 SLCO3A1Q9UIG8 710 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 H0Y3Z8 333 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 SERPINC1P01008 464 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 APOHP02749 345 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-210ENST00000525878 TIMP3P35625 211 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 NLRP5P59047 1200 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF155Q12901 538 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-210ENST00000525878 XRRA1Q6P2D8 792 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 SFTPA2Q8IWL1 248 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 KBTBD3Q8NAB2 608 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 CTCFLQ8NI51 663 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-210ENST00000525878 ARRDC2Q8TBH0 407 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 TMEM170AQ8WVE7 144 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 YME1L1Q96TA2 773 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 WDR12Q9GZL7 423 aaKnown RBP4.11□□□□□ -1.75
CSDE1-210ENST00000525878 ARNT2Q9HBZ2 717 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 NLRC4Q9NPP4 1024 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 G6PC2Q9NQR9 355 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 CGNL1Q0VF96 1302 aa4.11□□□□□ -1.75
CSDE1-210ENST00000525878 ERI2A8K979 691 aaKnown RBP4.1□□□□□ -1.75
CSDE1-210ENST00000525878 ACKR2O00590 384 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 SEPT4O43236 478 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 HSPA12AO43301 675 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 EDIL3O43854 480 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 CAND2O75155 1236 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 AMBPP02760 352 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 CDKN1AP38936 164 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 LIFRP42702 1097 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 TNFAIP1Q13829 316 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 OASLQ15646 514 aaKnown RBP4.1□□□□□ -1.75
CSDE1-210ENST00000525878 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 SULT6B1Q6IMI4 303 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 SYT13Q7L8C5 426 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 SATL1Q86VE3 508 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 SPATA22Q8NHS9 363 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 LRRC8CQ8TDW0 803 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 FIG4Q92562 907 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 FBXO17Q96EF6 278 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 SCRT2Q9NQ03 307 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 SIX4Q9UIU6 781 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 TCF19Q9Y242 345 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF711Q9Y462 761 aa4.1□□□□□ -1.75
CSDE1-210ENST00000525878 hDV102S1A0JD36 115 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 E7EVH7 732 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 ADAP00813 363 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 MCM3P25205 808 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 MARK3P27448 753 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 MCM2P49736 904 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 FUT6P51993 359 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 ARSFP54793 590 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 KRTAP10-3P60369 221 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 PLA2G4FQ68DD2 849 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 ATG16L2Q8NAA4 619 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 TANKQ92844 425 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 EGLN1Q9GZT9 426 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF334Q9HCZ1 680 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-210ENST00000525878 PTPRHQ9HD43 1115 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 TLR8Q9NR97 1041 aaKnown RBP4.09□□□□□ -1.75
CSDE1-210ENST00000525878 SPATS2LQ9NUQ6 558 aaKnown RBP4.09□□□□□ -1.75
CSDE1-210ENST00000525878 SLC9A2Q9UBY0 812 aa4.09□□□□□ -1.75
CSDE1-210ENST00000525878 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-210ENST00000525878 FGF17O60258 216 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 HBP1O60381 514 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 SLC22A3O75751 556 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 KCNA5P22460 613 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 ATP12AP54707 1039 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 PUM3Q15397 648 aaKnown RBP4.08□□□□□ -1.76
CSDE1-210ENST00000525878 SYT16Q17RD7 645 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 FBXO43Q4G163 708 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 C14orf177Q52M58 125 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 SH2D4BQ5SQS7 431 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 C19orf48Q6RUI8 117 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 SHFQ7M4L6 423 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 ZC3HC1Q86WB0 502 aaKnown RBP4.08□□□□□ -1.76
CSDE1-210ENST00000525878 RMDN3Q96TC7 470 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 CSF3RQ99062 836 aa4.08□□□□□ -1.76
CSDE1-210ENST00000525878 ELAC2Q9BQ52 826 aaKnown RBP4.08□□□□□ -1.76
CSDE1-210ENST00000525878 TRMT61BQ9BVS5 477 aaKnown RBP4.08□□□□□ -1.76
CSDE1-210ENST00000525878 ZNF696Q9H7X3 374 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms