RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 DEFB119Q8N690 84 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 ALG3Q92685 438 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 KLHL32Q96NJ5 620 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 IL12RB2Q99665 862 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 SUV39H2Q9H5I1 410 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 CAPN10Q9HC96 672 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 GUCA1BQ9UMX6 200 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 DMTF1Q9Y222 760 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 PPP2R2CQ9Y2T4 447 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 FADS3Q9Y5Q0 445 aa15.28■□□□□ 0.04
SF3B2-202ENST00000524475 A0A1B0GTW7 788 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 APOC4-APOC2K7ER74 178 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 TRAFD1O14545 582 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-202ENST00000524475 AREL1O15033 823 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 KHNYNO15037 678 aaKnown RBP15.27■□□□□ 0.04
SF3B2-202ENST00000524475 INSIG1O15503 277 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.04
SF3B2-202ENST00000524475 HTRA2O43464 458 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-202ENST00000524475 TSPAN6O43657 245 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 MAP3K6O95382 1288 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 APOC2P02655 101 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 SERPINF2P08697 491 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 KRT10P13645 584 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 CCNB1P14635 433 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 BCL2L1Q07817 233 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 ADCY2Q08462 1091 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 TMEM259Q4ZIN3 620 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 CCNYQ8ND76 341 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 TRIM58Q8NG06 486 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 ALS2CR12Q96Q35 445 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 LGMNQ99538 433 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 OSBPL8Q9BZF1 889 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 POLR1EQ9GZS1 481 aaKnown RBP15.27■□□□□ 0.04
SF3B2-202ENST00000524475 ATP8A1Q9Y2Q0 1164 aa15.27■□□□□ 0.04
SF3B2-202ENST00000524475 TRPM6Q9BX84 2022 aa15.27■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3KA0A087X1G2 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3FA6NER0 549 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 FAM47DPA6NHR8 397 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 HACD1B0YJ81 288 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 BCAT2O15382 392 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 MTSS1O43312 755 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 RNGTTO60942 597 aaKnown RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 ZNF189O75820 626 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 FSBPO95073 299 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 PIGNO95427 931 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 FTCDO95954 541 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 ABL2P42684 1182 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 SCNN1BP51168 640 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 PPP2CBP62714 309 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 DYNLT1P63172 113 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 RPS21P63220 83 aaKnown RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 PPP2CAP67775 309 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 ARHGAP8P85298 464 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 XRCC4Q13426 336 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 PRKD1Q15139 912 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TRIM61Q5EBN2 209 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 KAZNQ674X7 775 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3GQ6DHY5 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 NPNTQ6UXI9 565 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 PRPF39Q86UA1 669 aaKnown RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 HORMAD1Q86X24 394 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 ASB12Q8WXK4 309 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 P3H4Q92791 437 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 NUSAP1Q9BXS6 441 aaKnown RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 ZDHHC5Q9C0B5 715 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 KCNF1Q9H3M0 494 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 NT5MQ9NPB1 228 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 RBM22Q9NW64 420 aaKnown RBP eCLIP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 EIF2B4Q9UI10 523 aaKnown RBP15.26■□□□□ 0.03
SF3B2-202ENST00000524475 SLC6A14Q9UN76 642 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 PLXNA2O75051 1894 aa15.26■□□□□ 0.03
SF3B2-202ENST00000524475 ATXN2Q99700 1313 aaKnown RBP15.25■□□□□ 0.03
SF3B2-202ENST00000524475 UPK3BL1B0FP48 263 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 UPK3BL2E5RIL1 263 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 SPINT1O43278 529 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 TJP3O95049 919 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 PYGMP11217 842 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 TIMP2P16035 220 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 PECAM1P16284 738 aaPredicted RBP15.25■□□□□ 0.03
SF3B2-202ENST00000524475 GRIA4P48058 902 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 AFF3P51826 1226 aaKnown RBP15.25■□□□□ 0.03
SF3B2-202ENST00000524475 LIMK1P53667 647 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 POLR2LP62875 67 aaKnown RBP15.25■□□□□ 0.03
SF3B2-202ENST00000524475 RACK1P63244 317 aaKnown RBP15.25■□□□□ 0.03
SF3B2-202ENST00000524475 ELP6Q0PNE2 266 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 NOMO1Q15155 1222 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 SLC14A2Q15849 920 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 UGP2Q16851 508 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 ZNF284Q2VY69 593 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 SETMARQ53H47 684 aaPredicted RBP15.25■□□□□ 0.03
SF3B2-202ENST00000524475 CAMK1DQ8IU85 385 aa15.25■□□□□ 0.03
SF3B2-202ENST00000524475 ZCCHC9Q8N567 271 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 386.5 ms