RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	CANT1	Q8WVQ1	401 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SEPT8	Q92599	483 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NXNL1	Q96CM4	212 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	HDAC11	Q96DB2	347 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC45A3	Q96JT2	553 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC9A7	Q96T83	725 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	MLPH	Q9BV36	600 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	ADAMTS10	Q9H324	1103 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	PLEKHA5	Q9HAU0	1116 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	CDC14A	Q9UNH5	594 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	MTF2	Q9Y483	593 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NME7	Q9Y5B8	376 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	GOLGB1	Q14789	3259 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	RALGAPA2	Q2PPJ7	1873 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	FAM95C	A0A1B0GW59	222 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141		H3BMQ9	156 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	GOLGA8T	H3BQL2	631 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	ESRRB	O95718	433 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	AHSG	P02765	367 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	PSMA4	P25789	261 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	CD68	P34810	354 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	GRM5	P41594	1212 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC7A2	P52569	658 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	STX1B	P61266	288 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	GALNT1	Q10472	559 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	TBCEL	Q5QJ74	424 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	GRAMD4	Q6IC98	578 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	ABRAXAS1	Q6UWZ7	409 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	LYSMD3	Q7Z3D4	306 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	BNIPL	Q7Z465	357 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	RIOX2	Q8IUF8	465 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	CRYBG2	Q8N1P7	616 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	CBR4	Q8N4T8	237 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	PNPT1	Q8TCS8	783 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	COG8	Q96MW5	612 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	NPY6R	Q99463	290 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	NPL	Q9BXD5	320 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	DPEP3	Q9H4B8	488 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	RPF2	Q9H7B2	306 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	DHRS12	A0PJE2	317 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	SAC3D1	A6NKF1	404 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141		M0QYT0	321 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	BAIAP3	O94812	1187 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	ARIH2	O95376	493 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	PGK1	P00558	417 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	FCGR1A	P12314	374 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	ERCC2	P18074	760 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	NFKB1	P19838	968 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	FAS	P25445	335 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	HCAR3	P49019	387 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC12A2	P55011	1212 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	TPI1	P60174	286 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	ATP6V0D1	P61421	351 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	BNIP2	Q12982	314 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC36A3	Q495N2	470 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	ZNF484	Q5JVG2	852 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	ANKRD13A	Q8IZ07	590 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	PLEKHA8	Q96JA3	519 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	CNDP2	Q96KP4	475 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	TUBA1C	Q9BQE3	449 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	AGPAT4	Q9NRZ5	378 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	AKT3	Q9Y243	479 aa		10.35	□□□□□ -0.75
SPIDR-225	ENST00000524141	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	RNF103-CHMP3	A0A140T963	221 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	TRIM64B	A6NI03	449 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	SNAP91	O60641	907 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	GNAO1	P09471	354 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	OCM2	P0CE71	109 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	OCM	P0CE72	109 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	EPHX2	P34913	555 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	RELA	Q04206	551 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	FAM83E	Q2M2I3	478 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	PCID2	Q5JVF3	399 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	TMTC4	Q5T4D3	741 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	OTUD1	Q5VV17	481 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	CNST	Q6PJW8	725 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	LBX2	Q6XYB7	198 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	TP53INP2	Q8IXH6	220 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	SIX6OS1	Q8N1H7	587 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	BEST2	Q8NFU1	509 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	WNT8B	Q93098	351 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	NTAN1	Q96AB6	310 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	CENPN	Q96H22	339 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	OMD	Q99983	421 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	HOPX	Q9BPY8	73 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	APOL2	Q9BQE5	337 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC38A7	Q9NVC3	462 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	ERAP1	Q9NZ08	941 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	CLEC11A	Q9Y240	323 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	COQ6	Q9Y2Z9	468 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	FIS1	Q9Y3D6	152 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	SHROOM3	Q8TF72	1996 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	IPO13	O94829	963 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	ATE1	O95260	518 aa		10.34	□□□□□ -0.75
SPIDR-225	ENST00000524141	MYL3	P08590	195 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms