RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-250	ENST00000523746	RASSF8	Q8NHQ8	419 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	TMEM163	Q8TC26	289 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	FAM149B1	Q96BN6	582 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	RNF183	Q96D59	192 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	WDR77	Q9BQA1	342 aa	Predicted RBP	4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	TRMO	Q9BU70	441 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	GHITM	Q9H3K2	345 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	NSMCE4A	Q9NXX6	385 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	LIMA1	Q9UHB6	759 aa	Known RBP	4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	CARD8	Q9Y2G2	431 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	ADAM18	Q9Y3Q7	739 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	RUSC2	Q8N2Y8	1516 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	KLRF2	D3W0D1	207 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746		K7ENM7	598 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	LIAS	O43766	372 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	EPN2	O95208	641 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	MT-CYB	P00156	380 aa	Predicted RBP	4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	SPARC	P09486	303 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	IRF1	P10914	325 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	PCNA	P12004	261 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	ENO3	P13929	434 aa	Predicted RBP	4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	RASSF2	P50749	326 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	SHB	Q15464	509 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	EZH2	Q15910	746 aa	Known RBP	4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	DUSP6	Q16828	381 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	ZKSCAN2	Q63HK3	967 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	CYP20A1	Q6UW02	462 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	DENND6A	Q8IWF6	608 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	DHX40	Q8IX18	779 aa	Known RBP	4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	DNAJC10	Q8IXB1	793 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	FAM217A	Q8IXS0	508 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	KIAA2013	Q8IYS2	634 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	HORMAD2	Q8N7B1	307 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	PRSS3P2	Q8NHM4	247 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	PSPC1	Q8WXF1	523 aa	Known RBP	4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	NSUN4	Q96CB9	384 aa	Known RBP	4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	RSRC1	Q96IZ7	334 aa	Known RBP	4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	YME1L1	Q96TA2	773 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	NRIP3	Q9NQ35	241 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	ASAH2	Q9NR71	780 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	HCFC1R1	Q9NWW0	138 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	ANKRD10	Q9NXR5	420 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	HEY2	Q9UBP5	337 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	NDRG3	Q9UGV2	375 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	MKLN1	Q9UL63	735 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	GPR34	Q9UPC5	381 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	SLC45A1	Q9Y2W3	748 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	LYVE1	Q9Y5Y7	322 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	A3GALT2	U3KPV4	340 aa		4.92	□□□□□ -1.62
PTK2-250	ENST00000523746	SETD1B	Q9UPS6	1966 aa	Known RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746		A6NCN8	305 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	TTC36	A6NLP5	189 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	LRRC53	A6NM62	1247 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	AGAP14	A8MT82	685 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	USP17L23	D6RBM5	183 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	GFPT2	O94808	682 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	FGB	P02675	491 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	EIF2S1	P05198	315 aa	Known RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	CYP19A1	P11511	503 aa	Predicted RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	CHRNB2	P17787	502 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	TNFRSF1B	P20333	461 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	ITGAX	P20702	1163 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	AGA	P20933	346 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	RFC1	P35251	1148 aa	Predicted RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	GAD2	Q05329	585 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	GRIK3	Q13003	919 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	PDE1C	Q14123	709 aa	Predicted RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	VEPH1	Q14D04	833 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	MTX3	Q5HYI7	312 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746		Q5PR19	223 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	HEPHL1	Q6MZM0	1159 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	C16orf54	Q6UWD8	224 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	TRIL	Q7L0X0	811 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	ARHGAP12	Q8IWW6	846 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	NME8	Q8N427	588 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	ARFGAP1	Q8N6T3	406 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	ENGASE	Q8NFI3	743 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	CEP76	Q8TAP6	659 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	TMEM174	Q8WUU8	243 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	ARHGEF2	Q92974	986 aa	Known RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	PABPC5	Q96DU9	382 aa	Known RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	TIGD1	Q96MW7	591 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	CRAMP1	Q96RY5	1269 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	MSTO1	Q9BUK6	570 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	CDT1	Q9H211	546 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	SEPT11	Q9NVA2	429 aa	Known RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	TUBA8	Q9NY65	449 aa	Predicted RBP	4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	HAO1	Q9UJM8	370 aa		4.91	□□□□□ -1.62
PTK2-250	ENST00000523746	LY6G6E	A0A0G2JKS1	128 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746		A8MZ25	164 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	STMND1	H3BQB6	276 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	GTPBP1	O00178	669 aa	Known RBP	4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	BCAT2	O15382	392 aa	Predicted RBP	4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	TIPRL	O75663	272 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	PRF1	P14222	555 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	GNLY	P22749	145 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	AVPR1A	P37288	418 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	PIP4K2A	P48426	406 aa	Predicted RBP	4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	PPP3CC	P48454	512 aa		4.9	□□□□□ -1.63
PTK2-250	ENST00000523746	ALDH7A1	P49419	539 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms