RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 HSD17B3P37058 310 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF234Q14588 700 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 GAB4Q2WGN9 574 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 LEXMQ3ZCV2 418 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 C3orf62Q6ZUJ4 267 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 SRLQ86TD4 932 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 IGDCC3Q8IVU1 814 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 TEX26Q8N6G2 289 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 RPS6KL1Q9Y6S9 549 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 NDC80O14777 642 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 F7P08709 466 aaPredicted RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 ALPIP09923 528 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 TPSB2P20231 275 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 XPAP23025 273 aaPredicted RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 GRIA2P42262 883 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 ABL2P42684 1182 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 TRAF2Q12933 501 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 MPP3Q13368 585 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 TDGQ13569 410 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 TPSAB1Q15661 275 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 ARSIQ5FYB1 569 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 ANKRD7Q92527 254 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 RUBCNQ92622 972 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF669Q96BR6 464 aaPredicted RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 NSMCE3Q96MG7 304 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 CHRAC1Q9NRG0 131 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 POLR3BQ9NW08 1133 aaPredicted RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 HS3ST2Q9Y278 367 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 SDR42E2A6NKP2 422 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF189O75820 626 aaPredicted RBP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 MMP2P08253 660 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 TNFRSF8P28908 595 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SERPINA4P29622 427 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 IL12RB1P42701 662 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SKOR1P84550 965 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SLC20A2Q08357 652 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 DMC1Q14565 340 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 PTPRCAPQ14761 206 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 CARD16Q5EG05 197 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SIRPB2Q5JXA9 342 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ARMC12Q5T9G4 340 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 GPR153Q6NV75 609 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF534Q76KX8 674 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 HDXQ7Z353 690 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 LINC00523Q86TU6 105 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 UNC5BQ8IZJ1 945 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 GOLGA6L1Q8N7Z2 621 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 GANCQ8TET4 914 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 WFIKKN2Q8TEU8 576 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 STAMBPL1Q96FJ0 436 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ATP13A3Q9H7F0 1226 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 NINJ2Q9NZG7 142 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 THEGQ9P2T0 379 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 TBK1Q9UHD2 729 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 PRR23AA6NEV1 266 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SLC1A5Q15758 541 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 PTPRNQ16849 979 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 DNAJC21Q5F1R6 531 aaKnown RBP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 MICALCLQ6ZW33 695 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 STK40Q8N2I9 435 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 MFSD3Q96ES6 412 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF778Q96MU6 729 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 KLHL32Q96NJ5 620 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 NUDCD1Q96RS6 583 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 TSPYL1Q9H0U9 437 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 VPS45Q9NRW7 570 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 PLAAQ9Y263 795 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ERI2A8K979 691 aaKnown RBP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ARNTLO00327 626 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 PLK4O00444 970 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SYNCRIPO60506 623 aaKnown RBP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SIN3BO75182 1162 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 LEFTY1O75610 366 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 EGFP01133 1207 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 HSPA9P38646 679 aaKnown RBP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 PLK1P53350 603 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 GRSF1Q12849 480 aaKnown RBP eCLIP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 UBXN2BQ14CS0 331 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 MYLK3Q32MK0 819 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 LRRC8BQ6P9F7 803 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 MMAAQ8IVH4 418 aaKnown RBP9.43□□□□□ -0.9
SDCBP-212ENST00000523483 OR2A12Q8NGT7 310 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 LMLNQ96KR4 655 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 BPIFA1Q9NP55 256 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF446Q9NWS9 450 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 SLC27A6Q9Y2P4 619 aa9.43□□□□□ -0.9
SDCBP-212ENST00000523483 TCF20Q9UGU0 1960 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 NEMP1O14524 444 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 SHBGP04278 402 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 CDK16Q00536 496 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 CEP85LQ5SZL2 805 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 TTC7BQ86TV6 843 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PCDH20Q8N6Y1 951 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 OR6P1Q8NGX9 317 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 ATXN7L3BQ96GX2 97 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 MYO19Q96H55 970 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 TDRD1Q9BXT4 1180 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 ADGRE3Q9BY15 652 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 LRRC4CQ9HCJ2 640 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms