RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LIFP15018 202 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 CCR10P46092 362 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ATP1A2P50993 1020 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 HK3P52790 923 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ARF5P84085 180 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 CETN1Q12798 172 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 EIF4EBP2Q13542 120 aaPredicted RBP11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ARHGEF7Q14155 803 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 C16orf72Q14CZ0 275 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ARHGAP44Q17R89 818 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ATXN7L2Q5T6C5 722 aaPredicted RBP11.79□□□□□ -0.52
SDCBP-211ENST00000523441 TMEM164Q5U3C3 297 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 KCTD16Q68DU8 428 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 RETSATQ6NUM9 610 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 GJB7Q6PEY0 223 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 TAF8Q7Z7C8 310 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 TMEM110Q86TL2 294 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ZNF354CQ86Y25 554 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 FSTL5Q8N475 847 aaPredicted RBP11.79□□□□□ -0.52
SDCBP-211ENST00000523441 PCDH20Q8N6Y1 951 aaKnown RBP11.79□□□□□ -0.52
SDCBP-211ENST00000523441 DENND6BQ8NEG7 585 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 FAM46DQ8NEK8 389 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 RNF31Q96EP0 1072 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 SLC2A13Q96QE2 648 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 SLC12A9Q9BXP2 914 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 GOLPH3LQ9H4A5 285 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 UBE2TQ9NPD8 197 aaPredicted RBP11.79□□□□□ -0.52
SDCBP-211ENST00000523441 KLQ9UEF7 1012 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 ACSL6Q9UKU0 697 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 OR1A2Q9Y585 309 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
SDCBP-211ENST00000523441 I6L893 689 aaPredicted RBP11.78□□□□□ -0.52
SDCBP-211ENST00000523441 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
SDCBP-211ENST00000523441 MTSS1O43312 755 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 RASGRP1O95267 797 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 ERBB2P04626 1255 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 PCCBP05166 539 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 MPSTP25325 297 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 ACVRL1P37023 503 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 CASRP41180 1078 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 BLKP51451 505 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 MCCD1P59942 119 aaPredicted RBP11.78□□□□□ -0.52
SDCBP-211ENST00000523441 DEUP1Q05D60 604 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 ZNF805Q5CZA5 627 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 SETD3Q86TU7 594 aaPredicted RBP11.78□□□□□ -0.52
SDCBP-211ENST00000523441 DTX1Q86Y01 620 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 C1orf131Q8NDD1 294 aaKnown RBP11.78□□□□□ -0.52
SDCBP-211ENST00000523441 EHBP1Q8NDI1 1231 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 C9orf43Q8TAL5 461 aaPredicted RBP11.78□□□□□ -0.52
SDCBP-211ENST00000523441 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 ADNPQ9H2P0 1102 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 PLCB1Q9NQ66 1216 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 KCNK4Q9NYG8 393 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 LRIT1Q9P2V4 623 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
SDCBP-211ENST00000523441 A0A1W2PQ27 194 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 A0A1W2PQ64 194 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 A0A1W2PQC6 194 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 STMND1H3BQB6 276 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 DAB1O75553 588 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 ZNF202O95125 648 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 TNFP01375 233 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 NR1D1P20393 614 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 XPAP23025 273 aaPredicted RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 ALDH4A1P30038 563 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 OR1D5P58170 312 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 SRP54P61011 504 aaKnown RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 YPEL5P62699 121 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 GNA12Q03113 381 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 OTUD1Q5VV17 481 aaPredicted RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 KLHL10Q6JEL2 608 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 SPRED1Q7Z699 444 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 PHLDB2Q86SQ0 1253 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 CREBRFQ8IUR6 639 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 TP53I13Q8NBR0 393 aaPredicted RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 LMO3Q8TAP4 145 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 STK32AQ8WU08 396 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 NKD1Q969G9 470 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 PDXPQ96GD0 296 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 TBCBQ99426 244 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 C1QTNF7Q9BXJ2 289 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 CEP44Q9C0F1 390 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 INTS2Q9H0H0 1204 aaKnown RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 DPEP2Q9H4A9 486 aa11.77□□□□□ -0.53
SDCBP-211ENST00000523441 MRPL40Q9NQ50 206 aaKnown RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 AKAP7Q9P0M2 348 aaPredicted RBP11.77□□□□□ -0.53
SDCBP-211ENST00000523441 ICE1Q9Y2F5 2266 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 A1L4Q6 167 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 NKX2-8O15522 239 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 DUX1O43812 170 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 ZMPSTE24O75844 475 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 PRKCGP05129 697 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 HTR1BP28222 390 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 MLLT10P55197 1068 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 MAZP56270 477 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms