RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PPARGC1AQ9UBK2 798 aaKnown RBP26.28■■□□□ 1.8
PVT1-219ENST00000523427 OR12D3Q9UGF7 316 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 MAST4O15021 2626 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 COL27A1Q8IZC6 1860 aaPredicted RBP26.28■■□□□ 1.8
PVT1-219ENST00000523427 ETFBP38117 255 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 KLHL40Q2TBA0 621 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 HSP90AA4PQ58FG1 418 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 NAA35Q5VZE5 725 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 GDPD4Q6W3E5 623 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 B3GNT8Q7Z7M8 397 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 FBXO39Q8N4B4 442 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 TSACCQ96A04 125 aaPredicted RBP26.27■■□□□ 1.8
PVT1-219ENST00000523427 CCNL2Q96S94 520 aaPredicted RBP26.27■■□□□ 1.8
PVT1-219ENST00000523427 EPAS1Q99814 870 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 TMEM59LQ9UK28 342 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 FHOD1Q9Y613 1164 aa26.27■■□□□ 1.8
PVT1-219ENST00000523427 HECTD1Q9ULT8 2610 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 FAM72CH0Y354 149 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 PES1O00541 588 aaKnown RBP26.26■■□□□ 1.79
PVT1-219ENST00000523427 RIOK3O14730 519 aaKnown RBP26.26■■□□□ 1.79
PVT1-219ENST00000523427 GSRP00390 522 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 CTSEP14091 401 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 HGFP14210 728 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 PRKCSHP14314 528 aaPredicted RBP26.26■■□□□ 1.79
PVT1-219ENST00000523427 C1QBPQ07021 282 aaKnown RBP26.26■■□□□ 1.79
PVT1-219ENST00000523427 C15orf59Q2T9L4 293 aaPredicted RBP26.26■■□□□ 1.79
PVT1-219ENST00000523427 FAM72AQ5TYM5 149 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 FAM72DQ6L9T8 149 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 CLEC14AQ86T13 490 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 FAM72BQ86X60 149 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 PLPP6Q8IY26 295 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 MSANTD4Q8NCY6 345 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 PCDH19Q8TAB3 1148 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 WDR48Q8TAF3 677 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 CCDC74AQ96AQ1 378 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 C1QTNF7Q9BXJ2 289 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 OSBPL1AQ9BXW6 950 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 RABGEF1Q9UJ41 708 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 COQ6Q9Y2Z9 468 aa26.26■■□□□ 1.79
PVT1-219ENST00000523427 AREL1O15033 823 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 BUB1O43683 1085 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 MMEP08473 750 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 ITGA2BP08514 1039 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 RHOQP17081 205 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 SLC5A2P31639 672 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 ADRA1BP35368 520 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 GEMIN4P57678 1058 aaKnown RBP26.25■■□□□ 1.79
PVT1-219ENST00000523427 YPEL5P62699 121 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 CCL7P80098 99 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 NFATC3Q12968 1075 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 TGIF1Q15583 401 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 MAN2A1Q16706 1144 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 ARL13BQ3SXY8 428 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 MACC1Q6ZN28 852 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 RAB11FIP2Q7L804 512 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 BNIPLQ7Z465 357 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 NOP9Q86U38 636 aaKnown RBP26.25■■□□□ 1.79
PVT1-219ENST00000523427 SDR16C5Q8N3Y7 309 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 KYQ8NBH2 561 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 GFM1Q96RP9 751 aaKnown RBP26.25■■□□□ 1.79
PVT1-219ENST00000523427 TMEM51Q9NW97 253 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 KIAA1468Q9P260 1216 aa26.25■■□□□ 1.79
PVT1-219ENST00000523427 PLD2O14939 933 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 EFSO43281 561 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 RAMP2O60895 175 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 XPAP23025 273 aaPredicted RBP26.24■■□□□ 1.79
PVT1-219ENST00000523427 MAPKAPK2P49137 400 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 SRSF6Q13247 344 aaKnown RBP26.24■■□□□ 1.79
PVT1-219ENST00000523427 IRF4Q15306 451 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 NYAP1Q6ZVC0 841 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 TP53I13Q8NBR0 393 aaPredicted RBP26.24■■□□□ 1.79
PVT1-219ENST00000523427 RXFP2Q8WXD0 754 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 SCG3Q8WXD2 468 aaKnown RBP26.24■■□□□ 1.79
PVT1-219ENST00000523427 VOPP1Q96AW1 172 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 CPEB1Q9BZB8 566 aaKnown RBP26.24■■□□□ 1.79
PVT1-219ENST00000523427 TRIM4Q9C037 500 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 NDST4Q9H3R1 872 aa26.24■■□□□ 1.79
PVT1-219ENST00000523427 GJB6O95452 261 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 RPLP0P05388 317 aaKnown RBP26.23■■□□□ 1.79
PVT1-219ENST00000523427 UGT1A5P35504 534 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 ELOCQ15369 112 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 VWA3BQ502W6 1294 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 ENPP7Q6UWV6 458 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 USP53Q70EK8 1073 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 NLRP14Q86W24 1093 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 ARL10Q8N8L6 244 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 GDAP1L1Q96MZ0 367 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 FAM117AQ9C073 453 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 MAGEH1Q9H213 219 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 TMEM248Q9NWD8 314 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 GPR34Q9UPC5 381 aa26.23■■□□□ 1.79
PVT1-219ENST00000523427 HEMK1Q9Y5R4 338 aaPredicted RBP26.23■■□□□ 1.79
PVT1-219ENST00000523427 NTN3O00634 580 aaPredicted RBP26.22■■□□□ 1.79
PVT1-219ENST00000523427 TMCC1O94876 653 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 LRIG2O94898 1065 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 WISP1O95388 367 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 TIMP2P16035 220 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 MLLT3P42568 568 aaPredicted RBP26.22■■□□□ 1.79
PVT1-219ENST00000523427 BLKP51451 505 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 RAD51Q06609 339 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms