RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 BNIPLQ7Z465 357 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TMEM132CQ8N3T6 1108 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 RSPH1Q8WYR4 309 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 MTERF3Q96E29 417 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 NDNQ99608 321 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TINF2Q9BSI4 451 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TBCDQ9BTW9 1192 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TMEM63AO94886 807 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 GSNP06396 782 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 SLC16A1P53985 500 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 HIRAP54198 1017 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 C21orf59P57076 290 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 NCF4Q15080 339 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 STXBP5Q5T5C0 1151 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 POTEHQ6S545 545 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PANX3Q96QZ0 392 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 CAMKK2Q96RR4 588 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 ADAM2Q99965 735 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 SLC4A5Q9BY07 1137 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 B3GNT5Q9BYG0 378 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 MIEF1Q9NQG6 463 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 CNGB3Q9NQW8 809 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TAS2R1Q9NYW7 299 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 INVSQ9Y283 1065 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 AP3M1Q9Y2T2 418 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 GLI3P10071 1580 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PRR23D1E9PI22 279 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 KLF11O14901 512 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TYROBPO43914 113 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PRR23D2P0DMB1 279 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 BLVRAP53004 296 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 CMPK2Q5EBM0 449 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 UCMAQ8WVF2 138 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 STRA6Q9BX79 667 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PIGRP01833 764 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 FGFR1P11362 822 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ALDH6A1Q02252 535 aaKnown RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 BOP1Q14137 746 aaKnown RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 SLC25A52Q3SY17 297 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 C1orf220Q5T0J3 134 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ZNF276Q8N554 614 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 TMEM159Q96B96 161 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 NIFKQ9BYG3 293 aaKnown RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 PADI4Q9UM07 663 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 CILPO75339 1184 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 RECQL5O94762 991 aaPredicted RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ANXA6P08133 673 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 CDK18Q07002 472 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 EPS8Q12929 822 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 STARD3Q14849 445 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 TTC23Q5W5X9 447 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 NETO2Q8NC67 525 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 CSPG4P5Q96PW8 444 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 RHOJQ9H4E5 214 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 XPNPEP1Q9NQW7 623 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 STARD7Q9NQZ5 370 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ATP6AP2A0A1C7CYW4 349 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ATP6AP2O75787 350 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 GSTM1P09488 218 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 GBE1Q04446 702 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 C1DQ13901 141 aaKnown RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 LIN52Q52LA3 116 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ARMCX4Q5H9R4 360 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ARMC12Q5T9G4 340 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 DNAJB14Q8TBM8 379 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 DUSP16Q9BY84 665 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 FAM126AQ9BYI3 521 aaPredicted RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 DAPK2Q9UIK4 370 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 LEF1Q9UJU2 399 aaPredicted RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 MAFBQ9Y5Q3 323 aaPredicted RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 PTCH2Q9Y6C5 1203 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 EDIL3O43854 480 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 TCF4P15884 667 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 BEX3Q00994 111 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 HSDL1Q3SXM5 330 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 ADHFE1Q8IWW8 467 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 GALNT15Q8N3T1 639 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 MRPL45Q9BRJ2 306 aaKnown RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 CIPCQ9C0C6 399 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 MAF1Q9H063 256 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 CAB39Q9Y376 341 aaPredicted RBP13.92□□□□□ -0.18
SYNPO-205ENST00000522122 DLEC1Q9Y238 1755 aa13.92□□□□□ -0.18
SYNPO-205ENST00000522122 KPNA4O00629 521 aaPredicted RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 SIN3BO75182 1162 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 CFHP08603 1231 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 OR56A5P0C7T3 313 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 HGFP14210 728 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 BCL2L1Q07817 233 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 GJC2Q5T442 439 aaPredicted RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 UBAP2Q5T6F2 1119 aaKnown RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 LPCAT4Q643R3 524 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 C8orf59Q8N0T1 100 aaPredicted RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 TFAP2BQ92481 460 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 QKIQ96PU8 341 aaKnown RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms