RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 PCDHB18PQ96TA0 734 aa21.12■□□□□ 0.97
PABPC1-218ENST00000521865 NCAPGQ9BPX3 1015 aa21.12■□□□□ 0.97
PABPC1-218ENST00000521865 WRAP53Q9BUR4 548 aaKnown RBP21.12■□□□□ 0.97
PABPC1-218ENST00000521865 SLC13A1Q9BZW2 595 aa21.12■□□□□ 0.97
PABPC1-218ENST00000521865 TTYH3Q9C0H2 523 aa21.12■□□□□ 0.97
PABPC1-218ENST00000521865 TCEAL2Q9H3H9 227 aaPredicted RBP21.12■□□□□ 0.97
PABPC1-218ENST00000521865 SYNDIG1Q9H7V2 258 aa21.12■□□□□ 0.97
PABPC1-218ENST00000521865 RIOK3O14730 519 aaKnown RBP21.11■□□□□ 0.97
PABPC1-218ENST00000521865 TPP1O14773 563 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 AREL1O15033 823 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 CREB3O43889 395 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 ANXA6P08133 673 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 IGFALSP35858 605 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 PTP4A2Q12974 167 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 CLEC16AQ2KHT3 1053 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 WDR59Q6PJI9 974 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 RTL3Q8N8U3 475 aaKnown RBP21.11■□□□□ 0.97
PABPC1-218ENST00000521865 NEK11Q8NG66 645 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 KCNE4Q8WWG9 221 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 CASKIN2Q8WXE0 1202 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 CENPTQ96BT3 561 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 EPAS1Q99814 870 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 THSD1Q9NS62 852 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 DOLKQ9UPQ8 538 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 DAAM1Q9Y4D1 1078 aa21.11■□□□□ 0.97
PABPC1-218ENST00000521865 EME2A4GXA9 379 aaPredicted RBP21.1■□□□□ 0.97
PABPC1-218ENST00000521865 ITIH2P19823 946 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 RBMS1P29558 406 aaKnown RBP21.1■□□□□ 0.97
PABPC1-218ENST00000521865 ERVPABLB-1P60509 514 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 YPEL5P62699 121 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 KLHL40Q2TBA0 621 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 CDKAL1Q5VV42 579 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 DNAJC24Q6P3W2 148 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 FOXR1Q6PIV2 292 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 RBM44Q6ZP01 1051 aaKnown RBP21.1■□□□□ 0.97
PABPC1-218ENST00000521865 C3orf20Q8ND61 904 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 ANKRD20A12PQ8NF67 263 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 TPCN2Q8NHX9 752 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 HMCESQ96FZ2 354 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 HIC2Q96JB3 615 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 EXOC2Q96KP1 924 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 CATSPERBQ9H7T0 1116 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 MBNL1Q9NR56 388 aaKnown RBP21.1■□□□□ 0.97
PABPC1-218ENST00000521865 SATB2Q9UPW6 733 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 MYLKQ15746 1914 aa21.1■□□□□ 0.97
PABPC1-218ENST00000521865 RASA4BC9J798 803 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 KLK10O43240 276 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 CCP110O43303 1012 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 RASA4O43374 803 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 GCATO75600 419 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 DXOO77932 396 aaKnown RBP21.09■□□□□ 0.97
PABPC1-218ENST00000521865 DESP17661 470 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 EIF4A3P38919 411 aaKnown RBP21.09■□□□□ 0.97
PABPC1-218ENST00000521865 UCNP55089 124 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 GSCP56915 257 aaPredicted RBP21.09■□□□□ 0.97
PABPC1-218ENST00000521865 TMPRSS3P57727 454 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 PPARDQ03181 441 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 INO80DQ53TQ3 878 aaPredicted RBP21.09■□□□□ 0.97
PABPC1-218ENST00000521865 CFAP58Q5T655 872 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 ESRP1Q6NXG1 681 aaKnown RBP21.09■□□□□ 0.97
PABPC1-218ENST00000521865 PHF13Q86YI8 300 aaPredicted RBP21.09■□□□□ 0.97
PABPC1-218ENST00000521865 ATXN7L3BQ96GX2 97 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 MCEEQ96PE7 176 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 LRRC61Q9BV99 259 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 KLC2Q9H0B6 622 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 NOL6Q9H6R4 1146 aaKnown RBP21.09■□□□□ 0.97
PABPC1-218ENST00000521865 FANCLQ9NW38 375 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 TRPM6Q9BX84 2022 aa21.09■□□□□ 0.97
PABPC1-218ENST00000521865 SIGLEC16A6NMB1 481 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 TIMP2P16035 220 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 TSHRP16473 764 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 COPB1P53618 953 aaKnown RBP21.08■□□□□ 0.97
PABPC1-218ENST00000521865 YBEYP58557 167 aaPredicted RBP21.08■□□□□ 0.97
PABPC1-218ENST00000521865 ELP6Q0PNE2 266 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 PARP15Q460N3 678 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 TAF1BQ53T94 588 aaPredicted RBP21.08■□□□□ 0.97
PABPC1-218ENST00000521865 PERM1Q5SV97 790 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 C6orf132Q5T0Z8 1188 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 MACC1Q6ZN28 852 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 SLC35F3Q8IY50 421 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 LSM14AQ8ND56 463 aaKnown RBP21.08■□□□□ 0.97
PABPC1-218ENST00000521865 NAT6Q93015 286 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 VOPP1Q96AW1 172 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 VCPIP1Q96JH7 1222 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 BOCQ9BWV1 1114 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 CPNE5Q9HCH3 593 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 DKK3Q9UBP4 350 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 SIK3Q9Y2K2 1263 aa21.08■□□□□ 0.97
PABPC1-218ENST00000521865 DOCK4Q8N1I0 1966 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 LMO7DNF2Z398 122 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 TOR1BO14657 336 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 INSIG1O15503 277 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 PIGNO95427 931 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 CTSEP14091 401 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 BLKP51451 505 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 ZNF143P52747 638 aaPredicted RBP21.07■□□□□ 0.96
PABPC1-218ENST00000521865 SERINC3Q13530 473 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 LRRC14Q15048 493 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 TCEA2Q15560 299 aa21.07■□□□□ 0.96
PABPC1-218ENST00000521865 ARHGAP40Q5TG30 622 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms