RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 GREM1O60565 184 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 CXCL14O95715 111 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 LRG1P02750 347 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 GABRR2P28476 465 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 POLD2P49005 469 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 PPIGQ13427 754 aaKnown RBP eCLIP18.64■□□□□ 0.572e-7■■□□□ 11.8
TRAPPC9-210ENST00000521667 SLC14A2Q15849 920 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 MBLAC2Q68D91 279 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 LILRA6Q6PI73 481 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 OR13J1Q8NGT2 312 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 PPP1R14CQ8TAE6 165 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 GABPB2Q8TAK5 448 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 CALML6Q8TD86 181 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 MUC3BQ9H195 1237 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 RASSF4Q9H2L5 321 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 COPG2Q9UBF2 871 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 FBXO5Q9UKT4 447 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 ANKRD6Q9Y2G4 727 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 INSL6Q9Y581 213 aa18.64■□□□□ 0.57
TRAPPC9-210ENST00000521667 A0A0G2JND7 137 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 CBX4O00257 560 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 C1RP00736 705 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 DLDP09622 509 aaKnown RBP18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 ARFIP2P53365 341 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 IRF9Q00978 393 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 ZNF783Q6ZMS7 281 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 Q6ZNB5 142 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 ZCCHC23Q6ZST2 131 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 KIAA0408Q6ZU52 694 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 CCDC149Q6ZUS6 474 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 RAPH1Q70E73 1250 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 TMC7Q7Z402 723 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 MRPS31Q92665 395 aaKnown RBP18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 ERP27Q96DN0 273 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 MYLK2Q9H1R3 596 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 KCNK13Q9HB14 408 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 TLK1Q9UKI8 766 aa18.63■□□□□ 0.57
TRAPPC9-210ENST00000521667 SCAMP3O14828 347 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 TBL1XO60907 577 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 ADH1AP07327 375 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 FGF3P11487 239 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 KCNA4P22459 653 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CD151P48509 253 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 ZXDBP98169 803 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CYP4F8P98187 520 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 FPGSQ05932 587 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 LAMB3Q13751 1172 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 MYLKQ15746 1914 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 TAF1BQ53T94 588 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 GAREM2Q75VX8 874 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 HJURPQ8NCD3 748 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 NOD2Q9HC29 1040 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 THAP1Q9NVV9 213 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 FAM95CA0A1B0GW59 222 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 TYW5A2RUC4 315 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 H0Y626 953 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 SLC7A4O43246 635 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 LDB2O43679 373 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 C8AP07357 584 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CPA3P15088 417 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 SAT1P21673 171 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 RGRP47804 291 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 GALNT3Q14435 633 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CYTH1Q15438 398 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CCDC91Q7Z6B0 441 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 TMC8Q8IU68 726 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CRLF3Q8IUI8 442 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 SLC41A1Q8IVJ1 513 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 C10orf107Q8IVU9 208 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 HS6ST3Q8IZP7 471 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CARNMT1Q8N4J0 409 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 TRIB3Q96RU7 358 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 TMEM120AQ9BXJ8 343 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 LRRC3Q9BY71 257 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 ZNF395Q9H8N7 513 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 ECT2Q9H8V3 914 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 CHD5Q8TDI0 1954 aa18.62■□□□□ 0.57
TRAPPC9-210ENST00000521667 GFRA2O00451 464 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 INSIG1O15503 277 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 NDST3O95803 873 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 CR2P20023 1033 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 SCNN1BP51168 640 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 LCA5Q86VQ0 697 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 TMA16Q96EY4 203 aaKnown RBP18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 C20orf27Q9GZN8 174 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 NMRAL1Q9HBL8 299 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.61■□□□□ 0.573e-7■■■■□ 24.4
TRAPPC9-210ENST00000521667 LSM7Q9UK45 103 aaKnown RBP18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 ANAPC1Q9H1A4 1944 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 PHGDHO43175 533 aaKnown RBP18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 HAUS5O94927 633 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 LUC7L3O95232 432 aaKnown RBP18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 SERPINE1P05121 402 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 CKMP06732 381 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 SLC35E2BP0CK96 405 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 CES1P23141 567 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 RAB10P61026 200 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 NCALDP61601 193 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 ARF5P84085 180 aa18.61■□□□□ 0.57
TRAPPC9-210ENST00000521667 SLC12A1Q13621 1099 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms