RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 STK10O94804 968 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 SLU7O95391 586 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 DNTTP04053 509 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 CTSLP07711 333 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 IVDP26440 423 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 GKP32189 559 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 SLC8A1P32418 973 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 HSPA9P38646 679 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 SRSF5Q13243 272 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 CST6Q15828 149 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 ARSIQ5FYB1 569 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 ARHGEF18Q6ZSZ5 1173 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 PID1Q7Z2X4 250 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 PRPF39Q86UA1 669 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.49■□□□□ 0.07
LSM1-203ENST00000520755 PIP4K2CQ8TBX8 421 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 GANCQ8TET4 914 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 NELL1Q92832 810 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 TADA1Q96BN2 335 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 IMP4Q96G21 291 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 OXNAD1Q96HP4 312 aaPredicted RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 SEMA3CQ99985 751 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 HEPHQ9BQS7 1158 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 POLR1EQ9GZS1 481 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 PAK5Q9P286 719 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 RSPH14Q9UHP6 348 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 EVLQ9UI08 416 aaPredicted RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 SARDHQ9UL12 918 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 CYP8B1Q9UNU6 501 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 WASF2Q9Y6W5 498 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 FAM187AA6NFU0 413 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 KPNA3O00505 521 aaPredicted RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 LEFTY1O75610 366 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 ADH1BP00325 375 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 PRNPP04156 253 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 METAP1P53582 386 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 PTPN5P54829 565 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 SKOR1P84550 965 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 SLC7A5Q01650 507 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 ITKQ08881 620 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 PPP1R7Q15435 360 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 MYLK3Q32MK0 819 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 TTC31Q49AM3 519 aaPredicted RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 USP39Q53GS9 565 aaKnown RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 ITPRIPL1Q6GPH6 555 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 SYDE1Q6ZW31 735 aaPredicted RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 FAM124AQ86V42 546 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 PLPP6Q8IY26 295 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 FAM160A2Q8N612 972 aaPredicted RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 SPATA22Q8NHS9 363 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 FCRL5Q96RD9 977 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 NUDCD1Q96RS6 583 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 FERMT1Q9BQL6 677 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 SLC25A51Q9H1U9 297 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 PABPC3Q9H361 631 aaKnown RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 FEZ2Q9UHY8 353 aaPredicted RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 DMGDHQ9UI17 866 aaKnown RBP15.48■□□□□ 0.07
LSM1-203ENST00000520755 PPM1HQ9ULR3 514 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 R4GN57 208 aa15.48■□□□□ 0.07
LSM1-203ENST00000520755 A0A1W2PP55 124 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 PLK4O00444 970 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 TP73O15350 636 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 ZNF217O75362 1048 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 POP4O95707 220 aaKnown RBP15.47■□□□□ 0.07
LSM1-203ENST00000520755 MT-CYBP00156 380 aaPredicted RBP15.47■□□□□ 0.07
LSM1-203ENST00000520755 C5AR1P21730 350 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 CD86P42081 329 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 CSNK1DP48730 415 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 SCNN1BP51168 640 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 TPMTP51580 245 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 ZBTB16Q05516 673 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 RAD51Q06609 339 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 NSUN2Q08J23 767 aaKnown RBP eCLIP15.47■□□□□ 0.07
LSM1-203ENST00000520755 GPS1Q13098 491 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 SEMA5AQ13591 1074 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 TEX35Q5T0J7 233 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 FAM46CQ5VWP2 391 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 NCEH1Q6PIU2 408 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 KDELC1Q6UW63 502 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 MAATS1Q7Z4T9 603 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 SRLQ86TD4 932 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 AADATQ8N5Z0 425 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 FRMD1Q8N878 549 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 ZBTB44Q8NCP5 570 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 TMIEQ8NEW7 156 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 ATOH1Q92858 354 aaPredicted RBP15.47■□□□□ 0.07
LSM1-203ENST00000520755 SPACA7Q96KW9 195 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 RBM15Q96T37 977 aaKnown RBP eCLIP15.47■□□□□ 0.07
LSM1-203ENST00000520755 OMDQ99983 421 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 KCNH6Q9H252 994 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 ETNK1Q9HBU6 452 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 NOD2Q9HC29 1040 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 ITM2CQ9NQX7 267 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 FBXL12Q9NXK8 326 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 USP36Q9P275 1121 aaKnown RBP15.47■□□□□ 0.07
LSM1-203ENST00000520755 ASIC3Q9UHC3 531 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 SCML1Q9UN30 329 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 PCDHGA2Q9Y5H1 932 aa15.47■□□□□ 0.07
LSM1-203ENST00000520755 THADAQ6YHU6 1953 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms