RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 DHRS12A0PJE2 317 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 hCG_2039718K7EN88 272 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 KCNN4O15554 427 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 MTSS1O43312 755 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 HDCP19113 662 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 TFEBP19484 476 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 TYK2P29597 1187 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-208ENST00000519004 S100A5P33763 92 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 ATP5OP48047 213 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 LIG4P49917 911 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 DPY19L1Q2PZI1 675 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 STEAP4Q687X5 459 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 C8orf82Q6P1X6 216 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-208ENST00000519004 CMC1Q7Z7K0 106 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 PHF10Q8WUB8 498 aaKnown RBP13.68□□□□□ -0.22
PABPC1-208ENST00000519004 RTP4Q96DX8 246 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 MUS81Q96NY9 551 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF577Q9BSK1 485 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 C12orf4Q9NQ89 552 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 UBA2Q9UBT2 640 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-208ENST00000519004 KPNA7A9QM74 516 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 GABARAPO95166 117 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 CRHBPP24387 322 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 HK2P52789 917 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 CACNB3P54284 484 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 GP2P55259 537 aaKnown RBP13.67□□□□□ -0.22
PABPC1-208ENST00000519004 SNAP25P60880 206 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 GPLD1P80108 840 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 MRPS15P82914 257 aaKnown RBP13.67□□□□□ -0.22
PABPC1-208ENST00000519004 TAP1Q03518 808 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
PABPC1-208ENST00000519004 DGUOKQ16854 277 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 ADPRMQ3LIE5 342 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 PITRM1Q5JRX3 1037 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 STEAP3Q658P3 488 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 SLFN13Q68D06 897 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 IDO2Q6ZQW0 420 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 CATSPER4Q7RTX7 472 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 ADAMTSL2Q86TH1 951 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 NAT16Q8N8M0 369 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 KCTD6Q8NC69 237 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 TOR1AIP2Q8NFQ8 470 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 JPH3Q8WXH2 748 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-208ENST00000519004 TRIM63Q969Q1 353 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 DACH2Q96NX9 599 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 DEPDC7Q96QD5 511 aa13.67□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF717Q9BY31 904 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-208ENST00000519004 APOBEC3GQ9HC16 384 aaKnown RBP13.67□□□□□ -0.22
PABPC1-208ENST00000519004 H2AFYO75367 372 aaKnown RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 PIGNO95427 931 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 HLA-DRAP01903 254 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 MSL3P1P0C860 447 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 RRM2P31350 389 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 GABPAQ06546 454 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 CUL2Q13617 745 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SNX17Q15036 470 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 WDR44Q5JSH3 913 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 R3HCC1LQ7Z5L2 792 aaKnown RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 CADM2Q8N3J6 435 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 OR7A2PQ8NGA2 310 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SLC7A14Q8TBB6 771 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 MAGEE2Q8TD90 523 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SLC22A17Q8WUG5 538 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF606Q8WXB4 792 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 AGAP4Q96P64 663 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SNX15Q9NRS6 342 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 PLSCR3Q9NRY6 295 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 TBC1D13Q9NVG8 400 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ARHGAP28Q9P2N2 729 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 BAG5Q9UL15 447 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 A0A0G2JMP0 313 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ITGBL1O95965 494 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ARNTP27540 789 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 CD68P34810 354 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 MAGEA12P43365 314 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 POLD2P49005 469 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SEPHS1P49903 392 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 FCHO2Q0JRZ9 810 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 STX5Q13190 355 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 HADHQ16836 314 aaKnown RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ARL13AQ5H913 290 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 BRMS1LQ5PSV4 323 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ADCK1Q86TW2 530 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 GALNT12Q8IXK2 581 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 TMEM35BQ8NCS4 154 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 IL17RDQ8NFM7 739 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 JOSD2Q8TAC2 188 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 HDAC10Q969S8 669 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SLC10A4Q96EP9 437 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 MKRN2Q9H000 416 aaKnown RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SLA2Q9H6Q3 261 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 RSAD1Q9HA92 442 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 SPC25Q9HBM1 224 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 ATP13A2Q9NQ11 1180 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms