RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 LRP8Q14114 963 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 UGP2Q16851 508 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 RBM20Q5T481 1227 aaKnown RBP16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 PM20D1Q6GTS8 502 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 PIWIL4Q7Z3Z4 852 aaKnown RBP16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 KDELC2Q7Z4H8 507 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 PNPLA1Q8N8W4 532 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 SLCO4A1Q96BD0 722 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 CACNA2D2Q9NY47 1150 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 UTP6Q9NYH9 597 aaKnown RBP16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 PHF24Q9UPV7 400 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 AP4S1Q9Y587 144 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 MIA3Q5JRA6 1907 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 PRORSD1PA6NEY8 169 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 MEIS3P2A8K0S8 358 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 TRIM24O15164 1050 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 STRNO43815 780 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 DNAJB1P25685 340 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 EPHX2P34913 555 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 CHRNA4P43681 627 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 PSMD8P48556 350 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 REP15Q6BDI9 236 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 ZNF470Q6ECI4 717 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 FAM81AQ8TBF8 368 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 TSGA13Q96PP4 275 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 MRPL57Q9BQC6 102 aaKnown RBP16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 ATXN3LQ9H3M9 355 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 IGSF5Q9NSI5 407 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 CCDC167Q9P0B6 97 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 SUCOQ9UBS9 1254 aaKnown RBP16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 CNOT11Q9UKZ1 510 aaKnown RBP16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 AAR2Q9Y312 384 aaKnown RBP16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 SMIM35A0A1B0GVV1 85 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 H3BSA7 217 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 AP3B1O00203 1094 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 PENKP01210 267 aaPredicted RBP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 PSMC3P17980 439 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 NELFEP18615 380 aaKnown RBP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 AXLP30530 894 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 CSHL1Q14406 222 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 ZNF789Q5FWF6 425 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 RWDD4Q6NW29 188 aaKnown RBP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 TAC4Q86UU9 113 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 ARHGAP12Q8IWW6 846 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 LPGAT1Q92604 370 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 UNC93B1Q9H1C4 597 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 EPS15L1Q9UBC2 864 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 TCAF1Q9Y4C2 921 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 ATP5F1P24539 256 aaPredicted RBP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 DNAJB2P25686 324 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 LRPAP1P30533 357 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 SLC5A2P31639 672 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 CLCN2P51788 898 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 PLK1P53350 603 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 DNAJB13P59910 316 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 PCBP1Q15365 356 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 CYTH1Q15438 398 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 AGKQ53H12 422 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 DCLRE1AQ6PJP8 1040 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 CYP2R1Q6VVX0 501 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 C2CD4AQ8NCU7 369 aaPredicted RBP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 PPHLN1Q8NEY8 458 aaKnown RBP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 GRIN3AQ8TCU5 1115 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 ZNF597Q96LX8 424 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 ZNF512Q96ME7 567 aaPredicted RBP16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 OLFM1Q99784 485 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 SLC29A1Q99808 456 aa16.71■□□□□ 0.27
PCDHGA11-202ENST00000518882 CROCCQ5TZA2 2017 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 MBLAC1A4D2B0 266 aaPredicted RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 PSMD3O43242 534 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 F9P00740 461 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 CD151P48509 253 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 NR1H2P55055 460 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 USP46P62068 366 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 CDC42EP1Q00587 391 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 RHDQ02161 417 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 IKBKEQ14164 716 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 FASTKQ14296 549 aaKnown RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 MTX3Q5HYI7 312 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 TECRLQ5HYJ1 363 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 NOMO2Q5JPE7 1267 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 BTBD8Q5XKL5 378 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 PPP1R10Q96QC0 940 aaKnown RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 FCRL5Q96RD9 977 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 SIK2Q9H0K1 926 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 TRPV6Q9H1D0 765 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 GLOD4Q9HC38 313 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 TREX1Q9NSU2 369 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 GMPR2Q9P2T1 348 aaKnown RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 RGS17Q9UGC6 210 aaPredicted RBP16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 SARDHQ9UL12 918 aa16.7■□□□□ 0.26
PCDHGA11-202ENST00000518882 TMCO1Q9UM00 188 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms