RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CDKL1Q00532 357 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 TRIM25Q14258 630 aaKnown RBP6.73□□□□□ -1.33
CDH12-203ENST00000517378 PPP2R5DQ14738 602 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 ADRM1Q16186 407 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 PABPC1LQ4VXU2 614 aaKnown RBP6.73□□□□□ -1.33
CDH12-203ENST00000517378 BRMS1LQ5PSV4 323 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 FAM45BPQ6NSW5 357 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 ESRP1Q6NXG1 681 aaKnown RBP6.73□□□□□ -1.33
CDH12-203ENST00000517378 RANBP10Q6VN20 620 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 CHERPQ8IWX8 916 aaKnown RBP6.73□□□□□ -1.33
CDH12-203ENST00000517378 ATPAF2Q8N5M1 289 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 SPATA22Q8NHS9 363 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 FAM45AQ8TCE6 357 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 DDI1Q8WTU0 396 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 ZNF597Q96LX8 424 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 PKMYT1Q99640 499 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 POMKQ9H5K3 350 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 ATP13A1Q9HD20 1204 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 CACNA2D2Q9NY47 1150 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 FNIP2Q9P278 1114 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 EPS15L1Q9UBC2 864 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 PACSIN3Q9UKS6 424 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 PLXNA3P51805 1871 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 TRPM7Q96QT4 1865 aa6.73□□□□□ -1.33
CDH12-203ENST00000517378 TCRBV3S1A0A5B6 114 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 TMEM233B4DJY2 109 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 IRAK2O43187 625 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 RNASEH2AO75792 299 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 OR6B1O95007 311 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 FAM58BPP0C7Q3 252 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 ETS2P15036 469 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 IGFBP6P24592 240 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 CLCN5P51795 746 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 PSME3P61289 254 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 NFKB2Q00653 900 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 RHDQ02161 417 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 NRG1Q02297 640 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 STX5Q13190 355 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 MAP7Q14244 749 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 ZNF460Q14592 562 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 POU6F1Q14863 301 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 TIGD7Q6NT04 549 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 FAM171BQ6P995 826 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 CNSTQ6PJW8 725 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 ARHGAP36Q6ZRI8 547 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 USP50Q70EL3 339 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 LRRC49Q8IUZ0 686 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 AFAP1L2Q8N4X5 818 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 DQX1Q8TE96 717 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 HEXDCQ8WVB3 486 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 USP13Q92995 863 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 CELF6Q96J87 481 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 MS4A4AQ96JQ5 239 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 PPP1R36Q96LQ0 422 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 NPAS2Q99743 824 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 OMDQ99983 421 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 FICDQ9BVA6 458 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 MRPL1Q9BYD6 325 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 SENP6Q9GZR1 1112 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 EML4Q9HC35 981 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 CD300AQ9UGN4 299 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 IPO11Q9UI26 975 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 PCDHGB4Q9UN71 923 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 PCDHGB5Q9Y5G0 923 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 MYO16Q9Y6X6 1858 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 A8MT66 165 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 WASH4PA8MWX3 477 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 FAM155AB1AL88 458 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 STX16-NPEPL1H3BU86 382 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 FBP2O00757 339 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 TREHO43280 583 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 IPO13O94829 963 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 PAPSS2O95340 614 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 PGM3O95394 542 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 MT-CYBP00156 380 aaPredicted RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 ASLP04424 464 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 CPB1P15086 417 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 PCSK1P29120 753 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 SLC26A3P40879 764 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 LEPRP48357 1165 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 ACADVLP49748 655 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 PSEN2P49810 448 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 PGGT1BP53609 377 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 RABGGTBP53611 331 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 ILF2Q12905 390 aaKnown RBP6.72□□□□□ -1.33
CDH12-203ENST00000517378 CTBP1Q13363 440 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 NADK2Q4G0N4 442 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 BTBD8Q5XKL5 378 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 REP15Q6BDI9 236 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 NXNQ6DKJ4 435 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 ZNF470Q6ECI4 717 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 B3GNT6Q6ZMB0 384 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 ARHGAP22Q7Z5H3 698 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 ANKRD23Q86SG2 305 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 DPP9Q86TI2 863 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 CARM1Q86X55 608 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 SLC22A9Q8IVM8 553 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 IPMKQ8NFU5 416 aa6.72□□□□□ -1.33
CDH12-203ENST00000517378 NPLOC4Q8TAT6 608 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms