RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 C8orf82Q6P1X6 216 aaPredicted RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 SYNE3Q6ZMZ3 975 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 BBS12Q6ZW61 710 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 SERPINA11Q86U17 422 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TRIM74Q86UV6 250 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TRIM73Q86UV7 250 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 SPATA2LQ8IUW3 424 aaPredicted RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 ESX1Q8N693 406 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 ZMIZ2Q8NF64 920 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 CMASQ8NFW8 434 aaPredicted RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 LINS1Q8NG48 757 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 PHF21BQ96EK2 531 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 MED30Q96HR3 178 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TWNKQ96RR1 684 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 DCLK3Q9C098 648 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 CATSPERBQ9H7T0 1116 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 CHODLQ9H9P2 273 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 NOD2Q9HC29 1040 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 HDAC6Q9UBN7 1215 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 WNT16Q9UBV4 365 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 GDAQ9Y2T3 454 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TTLL3Q9Y4R7 772 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 PRDM2Q13029 1718 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 MAPKBP1O60336 1514 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 CEP170Q5SW79 1584 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 A6NCN8 305 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 A6NLC8 198 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 MS4A18H0YCH9 400 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 STX16-NPEPL1H3BU86 382 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 STX16O14662 325 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 RGS14O43566 566 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 STRNO43815 780 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 DHX16O60231 1041 aaKnown RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 TSPAN3O60637 253 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 CLDN7O95471 211 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 IGKV3-20P01619 116 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 HOXC6P09630 235 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 FGF3P11487 239 aaPredicted RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 CKMT1AP12532 417 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 KRT10P13645 584 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 ENO3P13929 434 aaPredicted RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 PTMSP20962 102 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 AVPR1AP37288 418 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 GPR12P47775 334 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 ENTPD1P49961 510 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 GPS2Q13227 327 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 TRPC3Q13507 836 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 GPR18Q14330 331 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 IL13RA2Q14627 380 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 ANKRD1Q15327 319 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 DNTTIP2Q5QJE6 756 aaKnown RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 MAP3K21Q5TCX8 1036 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 OTUD1Q5VV17 481 aaPredicted RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 FASTKD5Q7L8L6 764 aaKnown RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 TMPRSS12Q86WS5 348 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 C2CD5Q86YS7 1000 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 CADM3Q8N126 398 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 IQCF1Q8N6M8 205 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 TSPYL6Q8N831 410 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 ANKRD44Q8N8A2 993 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 TEX45Q8NA69 505 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 SETD9Q8NE22 299 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 OR4N2Q8NGD1 307 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 AFG1LQ8WV93 481 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 TMEM170AQ8WVE7 144 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 HERVK_113Q902F9 699 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 NR4A3Q92570 626 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 RILPL2Q969X0 211 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 SLITRK1Q96PX8 696 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 TREX2Q9BQ50 279 aaPredicted RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 NPLQ9BXD5 320 aaPredicted RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 RMI1Q9H9A7 625 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 RIC8AQ9NPQ8 531 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 CD93Q9NPY3 652 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 ATP8A2Q9NTI2 1148 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 HIF1ANQ9NWT6 349 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 GGA3Q9NZ52 723 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 NCKIPSDQ9NZQ3 722 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 IFT80Q9P2H3 777 aaPredicted RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 IL36RNQ9UBH0 155 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 FZD10Q9ULW2 581 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 DHDHQ9UQ10 334 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 RRP7AQ9Y3A4 280 aaKnown RBP3.42□□□□□ -1.86
HERC4-215ENST00000515753 RAP2CQ9Y3L5 183 aa3.42□□□□□ -1.86
HERC4-215ENST00000515753 CHD1O14646 1710 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 CARMIL1Q5VZK9 1371 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 A0A087WYN8 130 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 VWA3AA6NCI4 1184 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 OR6C75A6NL08 312 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 STMND1H3BQB6 276 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 I6L893 689 aaPredicted RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 HSPB6O14558 160 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 ACOT8O14734 319 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 GRID2O43424 1007 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 LDB2O43679 373 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 PAPSS2O95340 614 aaPredicted RBP3.41□□□□□ -1.86
HERC4-215ENST00000515753 CYP1A2P05177 515 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 POLBP06746 335 aa3.41□□□□□ -1.86
HERC4-215ENST00000515753 CPA1P15085 419 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms