RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LRRC1Q9BTT6 524 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 TM6SF2Q9BZW4 377 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 MFSD1Q9H3U5 465 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 DKK3Q9UBP4 350 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 IL36AQ9UHA7 158 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 FAM153AQ9UHL3 310 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 SCML1Q9UN30 329 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 LOC285095A0A1B0GVY8 99 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 GFRA3O60609 400 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 AP2A1O95782 977 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 ADH1BP00325 375 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 CTSLP07711 333 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 TPSB2P20231 275 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 SERPINA4P29622 427 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 ADRA1AP35348 466 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 CD86P42081 329 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 SUOXP51687 545 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 COPAP53621 1224 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 ITKQ08881 620 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 GPS1Q13098 491 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 KCNJ11Q14654 390 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 TPSAB1Q15661 275 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 FAM46CQ5VWP2 391 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 Q6ZS52 159 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 HOOK3Q86VS8 718 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 STK40Q8N2I9 435 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 RUBCNQ92622 972 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 FAM131CQ96AQ9 280 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 EXOC2Q96KP1 924 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 TRIB3Q96RU7 358 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 MLPHQ9BV36 600 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 TDRD1Q9BXT4 1180 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 MTG2Q9H4K7 406 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 SUV39H2Q9H5I1 410 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 ETNK1Q9HBU6 452 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 RAB6BQ9NRW1 208 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 WHRNQ9P202 907 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 EVLQ9UI08 416 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 UTP11Q9Y3A2 253 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 PPIL1Q9Y3C6 166 aa12.1□□□□□ -0.47
PDLIM5-220ENST00000514830 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 C1QTNF3-AMACRE9PGA6 284 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 DNALI1O14645 258 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ABCB7O75027 752 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 LEFTY1O75610 366 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ITIH2P19823 946 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ITGB7P26010 798 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 HOXA6P31267 233 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ADCY8P40145 1251 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 BCL2L1Q07817 233 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 TRAF2Q12933 501 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 MORF4L2Q15014 288 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ZNF805Q5CZA5 627 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ZNF776Q68DI1 518 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 CCDC70Q6NSX1 233 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 KIAA1211LQ6NV74 962 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 BRAT1Q6PJG6 821 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 TMEM92Q6UXU6 159 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 RANBP10Q6VN20 620 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 GDPD4Q6W3E5 623 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 PRUNE1Q86TP1 453 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 LINC00523Q86TU6 105 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ZNF366Q8N895 744 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 MCUQ8NE86 351 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 SPATA22Q8NHS9 363 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 SNF8Q96H20 258 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 PPP1R16AQ96I34 528 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 MRGPRX2Q96LB1 330 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 RBM15Q96T37 977 aaKnown RBP eCLIP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 TRIM51Q9BSJ1 452 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 HDAC8Q9BY41 377 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 FRMD8Q9BZ67 464 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 POLMQ9NP87 494 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ZDHHC4Q9NPG8 344 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 ASIC3Q9UHC3 531 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 TPX2Q9ULW0 747 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 TTLL3Q9Y4R7 772 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 RAI2Q9Y5P3 530 aa12.09□□□□□ -0.47
PDLIM5-220ENST00000514830 CACNA1HO95180 2353 aa12.08□□□□□ -0.47
PDLIM5-220ENST00000514830 AP3B1O00203 1094 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 TP73O15350 636 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 GJB3O75712 270 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 SEC31AO94979 1220 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 PGLSO95336 258 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 NDST3O95803 873 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 MT-CYBP00156 380 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 PRLP01236 227 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms