RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 MBNL1Q9NR56 388 aaKnown RBP13.48□□□□□ -0.25
PFDN1-206ENST00000514611 IPO11Q9UI26 975 aaKnown RBP13.48□□□□□ -0.25
PFDN1-206ENST00000514611 AP4E1Q9UPM8 1137 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 ANKRD11Q6UB99 2663 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 NEMP2A6NFY4 417 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 J3KR12 359 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 FGF10O15520 208 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 AQP9O43315 295 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 TM7SF2O76062 418 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 TIMP2P16035 220 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 JUNDP17535 347 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 PSMA2P25787 234 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 ABCG1P45844 678 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 YBEYP58557 167 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 E2F1Q01094 437 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 RAD51Q06609 339 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 MAMLD1Q13495 774 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 KLHL40Q2TBA0 621 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 DEFB133Q30KQ1 61 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 SOWAHCQ53LP3 525 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 INO80DQ53TQ3 878 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 UMODL1-AS1Q8N2C9 162 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 FAM181AQ8N9Y4 354 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 TP53I13Q8NBR0 393 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 IFI44Q8TCB0 444 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 LMX1AQ8TE12 382 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 CXorf40AQ8TE69 158 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 CASKIN2Q8WXE0 1202 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 ASB12Q8WXK4 309 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 NCAPGQ9BPX3 1015 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 SNRNP25Q9BV90 132 aaKnown RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 DUSP23Q9BVJ7 150 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 LRRC19Q9H756 370 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 UBA2Q9UBT2 640 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-206ENST00000514611 COQ6Q9Y2Z9 468 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 MFHAS1Q9Y4C4 1052 aa13.47□□□□□ -0.25
PFDN1-206ENST00000514611 ARID1BQ8NFD5 2236 aaPredicted RBP13.46□□□□□ -0.25
PFDN1-206ENST00000514611 OPA1O60313 960 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 PRKCGP05129 697 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 CCDC172P0C7W6 258 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 TNFAIP3P21580 790 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 EIF2S3P41091 472 aaKnown RBP13.46□□□□□ -0.25
PFDN1-206ENST00000514611 RGRP47804 291 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 C1orf61Q13536 156 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 IRF4Q15306 451 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 ASIC2Q16515 512 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 CDKN3Q16667 212 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 CDCP2Q5VXM1 449 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 PLEKHA7Q6IQ23 1121 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 ZCCHC8Q6NZY4 707 aaKnown RBP13.46□□□□□ -0.25
PFDN1-206ENST00000514611 GUSBP11Q6P575 273 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 ZSWIM9Q86XI8 627 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 PHACTR4Q8IZ21 702 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 CACTIN-AS1Q8N1I8 211 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 KCTD15Q96SI1 283 aaPredicted RBP13.46□□□□□ -0.25
PFDN1-206ENST00000514611 LRRC61Q9BV99 259 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 SLC39A8Q9C0K1 460 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 DHX35Q9H5Z1 703 aaKnown RBP13.46□□□□□ -0.25
PFDN1-206ENST00000514611 HAUS4Q9H6D7 363 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
PFDN1-206ENST00000514611 PARVAQ9NVD7 372 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 DKK3Q9UBP4 350 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 APOBEC3BQ9UH17 382 aaKnown RBP13.46□□□□□ -0.25
PFDN1-206ENST00000514611 PCSK1NQ9UHG2 260 aa13.46□□□□□ -0.25
PFDN1-206ENST00000514611 TRPM6Q9BX84 2022 aa13.46□□□□□ -0.26
PFDN1-206ENST00000514611 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 EEF2KO00418 725 aaKnown RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 CASC3O15234 703 aaKnown RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 GCATO75600 419 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 GP1BAP07359 652 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 CELA2BP08218 269 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 C6P13671 934 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 DESP17661 470 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 THOP1P52888 689 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 TCEA2Q15560 299 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 CRTC1Q6UUV9 634 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 ARHGAP36Q6ZRI8 547 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 NYAP1Q6ZVC0 841 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 CYP4V2Q6ZWL3 525 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 EFL1Q7Z2Z2 1120 aaKnown RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 ZNF571Q7Z3V5 609 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 NPWQ8N729 165 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 SNIP1Q8TAD8 396 aaKnown RBP13.45□□□□□ -0.26
PFDN1-206ENST00000514611 VCPIP1Q96JH7 1222 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 DEPDC7Q96QD5 511 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 BPIFA3Q9BQP9 254 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 PCDH12Q9NPG4 1184 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 MYO6Q9UM54 1294 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 CSNK1G3Q9Y6M4 447 aa13.45□□□□□ -0.26
PFDN1-206ENST00000514611 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 BUB1BO60566 1050 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 PRAMEF11O60813 436 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 CSO75390 466 aaKnown RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 MPOP05164 745 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 TGM2P21980 687 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 XPAP23025 273 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 MIPP30301 263 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms