RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GSRP00390 522 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 PRNPP04156 253 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 OAS2P29728 719 aaKnown RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 CETN2P41208 172 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 DPP6P42658 865 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 TNNT3P45378 269 aaPredicted RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 PSMD8P48556 350 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 LMNB2Q03252 620 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 RAD51Q06609 339 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 ZNF33AQ06730 810 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 IL10RBQ08334 325 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 PTK6Q13882 451 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 RFTN1Q14699 578 aaPredicted RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 CYTH1Q15438 398 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 ARSIQ5FYB1 569 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 WDR45BQ5MNZ6 344 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 SYCP2LQ5T4T6 812 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 TMCO4Q5TGY1 634 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 C22orf39Q6P5X5 142 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 LEKR1Q6ZMV7 388 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 SPOCD1Q6ZMY3 1216 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 DPY19L3Q6ZPD9 716 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 FAM124AQ86V42 546 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 RYBPQ8N488 228 aaPredicted RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 DEFB119Q8N690 84 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 ATL2Q8NHH9 583 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 PCDH19Q8TAB3 1148 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 PIP4K2CQ8TBX8 421 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 GRK7Q8WTQ7 553 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 IFT81Q8WYA0 676 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 FOXJ1Q92949 421 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 ART4Q93070 314 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 LRRC45Q96CN5 670 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 FAF2Q96CS3 445 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 LRIG1Q96JA1 1093 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 RNF157Q96PX1 679 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 ZNF670Q9BS34 389 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 GPR174Q9BXC1 333 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 PCED1AQ9H1Q7 454 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 NEUROG2Q9H2A3 272 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 ARRDC1-AS1Q9H2J1 176 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 TNKS2Q9H2K2 1166 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 IL36AQ9UHA7 158 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 SARDHQ9UL12 918 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 DRG1Q9Y295 367 aaKnown RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 NFS1Q9Y697 457 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 KIAA1549LQ6ZVL6 1849 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 DOCK4Q8N1I0 1966 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 A0A1W2PP55 124 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 LRRD1A4D1F6 860 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 KPNA3O00505 521 aaPredicted RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 FOXD2O60548 495 aaPredicted RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 TMCC1O94876 653 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 ECEL1O95672 775 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 CTSLP07711 333 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 ZNF806P0C7X5 589 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 ZFXP17010 805 aaPredicted RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 ITIH2P19823 946 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 ACSL1P33121 698 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 PTGER3P43115 390 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 RPL21P46778 160 aaKnown RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 CSNK1DP48730 415 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 CCNHP51946 323 aaPredicted RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 RHOAP61586 193 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 CREB5Q02930 508 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 CAV1Q03135 178 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 NSUN2Q08J23 767 aaKnown RBP eCLIP8.43□□□□□ -1.06
CCL28-204ENST00000514421 CBLBQ13191 982 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 PAFAH1B3Q15102 231 aaKnown RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 TERF2Q15554 542 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 OASLQ15646 514 aaKnown RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 UAP1Q16222 522 aaPredicted RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 LYSMD4Q5XG99 296 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 MFSD7Q6UXD7 560 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 BBS12Q6ZW61 710 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 ADAT2Q7Z6V5 191 aaKnown RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 CACUL1Q86Y37 369 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 RELL1Q8IUW5 271 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 SYT12Q8IV01 421 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 TP53INP2Q8IXH6 220 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 NPWQ8N729 165 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 PQLC3Q8N755 202 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 NETO2Q8NC67 525 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 CHST14Q8NCH0 376 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 OR2AP1Q8NGE2 309 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 NSMCE1Q8WV22 266 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 PIGKQ92643 395 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 RNF25Q96BH1 459 aaPredicted RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 GDAP1L1Q96MZ0 367 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 ZNF599Q96NL3 588 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 FMO2Q99518 471 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 TRIM51Q9BSJ1 452 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 TSPYL1Q9H0U9 437 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 SP110Q9HB58 689 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 PDFQ9HBH1 243 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 CD93Q9NPY3 652 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 DYRK4Q9NR20 520 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 PSD3Q9NYI0 1048 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms