RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 OPHN1O60890 802 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 IGSF6O95976 241 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 ACADMP11310 421 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 CES1P23141 567 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 GLDCP23378 1020 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 DEKP35659 375 aaKnown RBP20.44■□□□□ 0.86
USP53-208ENST00000514305 RHOAP61586 193 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 SLC10A2Q12908 348 aaPredicted RBP20.44■□□□□ 0.86
USP53-208ENST00000514305 KLF1Q13351 362 aaPredicted RBP20.44■□□□□ 0.86
USP53-208ENST00000514305 GRM3Q14832 879 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 AADACL2Q6P093 401 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 NPNTQ6UXI9 565 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 LINGO4Q6UY18 593 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 PRCCQ92733 491 aaPredicted RBP20.44■□□□□ 0.86
USP53-208ENST00000514305 SIPA1Q96FS4 1042 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 ZNF419Q96HQ0 510 aaPredicted RBP20.44■□□□□ 0.86
USP53-208ENST00000514305 VAT1Q99536 393 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 PDFQ9HBH1 243 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 FSCN3Q9NQT6 498 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 SLCO3A1Q9UIG8 710 aa20.44■□□□□ 0.86
USP53-208ENST00000514305 CFAP69A5D8W1 941 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 MEI4A8MW99 385 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 ARHGAP33O14559 1287 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 ALOX15BO15296 676 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 KRT37O76014 449 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 TMCC1O94876 653 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 GSRP00390 522 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 RBP3P10745 1247 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 CCNB1P14635 433 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 STK19P49842 368 aaPredicted RBP20.43■□□□□ 0.86
USP53-208ENST00000514305 NSUN2Q08J23 767 aaKnown RBP eCLIP20.43■□□□□ 0.86
USP53-208ENST00000514305 TUBB2AQ13885 445 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 SLC45A4Q5BKX6 768 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 C22orf39Q6P5X5 142 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 DARS2Q6PI48 645 aaKnown RBP20.43■□□□□ 0.86
USP53-208ENST00000514305 ZC3H18Q86VM9 953 aaKnown RBP20.43■□□□□ 0.86
USP53-208ENST00000514305 TMPRSS6Q8IU80 811 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 MINDY1Q8N5J2 469 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 OR8D1Q8WZ84 308 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 TOE1Q96GM8 510 aaKnown RBP20.43■□□□□ 0.86
USP53-208ENST00000514305 TUBB2BQ9BVA1 445 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 MKRN2Q9H000 416 aaKnown RBP20.43■□□□□ 0.86
USP53-208ENST00000514305 ITM2CQ9NQX7 267 aa20.43■□□□□ 0.86
USP53-208ENST00000514305 USP36Q9P275 1121 aaKnown RBP20.43■□□□□ 0.86
USP53-208ENST00000514305 TTC34A8MYJ7 566 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 MAP3K6O95382 1288 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 MT-CO1P00395 513 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 PECAM1P16284 738 aaPredicted RBP20.42■□□□□ 0.86
USP53-208ENST00000514305 OXTRP30559 389 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 STIP1P31948 543 aaKnown RBP20.42■□□□□ 0.86
USP53-208ENST00000514305 MMP13P45452 471 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 NUMBP49757 651 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 ADCY2Q08462 1091 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 CCDC15Q0P6D6 951 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 ELAVL3Q14576 367 aaKnown RBP20.42■□□□□ 0.86
USP53-208ENST00000514305 CCNG2Q16589 344 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 CARD16Q5EG05 197 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 RALGPS1Q5JS13 557 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 MAML1Q92585 1016 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 MYO19Q96H55 970 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 GDAP1L1Q96MZ0 367 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 LGMNQ99538 433 aa20.42■□□□□ 0.86
USP53-208ENST00000514305 WSB2Q9NYS7 404 aaPredicted RBP20.42■□□□□ 0.86
USP53-208ENST00000514305 SAE1Q9UBE0 346 aaPredicted RBP20.42■□□□□ 0.86
USP53-208ENST00000514305 FEZ2Q9UHY8 353 aaPredicted RBP20.42■□□□□ 0.86
USP53-208ENST00000514305 UPK3BL1B0FP48 263 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 UPK3BL2E5RIL1 263 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 POP4O95707 220 aaKnown RBP20.41■□□□□ 0.86
USP53-208ENST00000514305 PRKCHP24723 683 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 ACTN2P35609 894 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 TPMTP51580 245 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 CAMK2GQ13555 558 aaPredicted RBP20.41■□□□□ 0.86
USP53-208ENST00000514305 FAM46CQ5VWP2 391 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 ARHGAP36Q6ZRI8 547 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 TP53INP2Q8IXH6 220 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 RYBPQ8N488 228 aaPredicted RBP20.41■□□□□ 0.86
USP53-208ENST00000514305 TEX26Q8N6G2 289 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 NETO2Q8NC67 525 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 OR2AP1Q8NGE2 309 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 OR2T3Q8NH03 318 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 KIF18AQ8NI77 898 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 HTR3CQ8WXA8 447 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 LRIG1Q96JA1 1093 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 QKIQ96PU8 341 aaKnown RBP eCLIP20.41■□□□□ 0.86
USP53-208ENST00000514305 PSKH2Q96QS6 385 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 GPR174Q9BXC1 333 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 RBM22Q9NW64 420 aaKnown RBP eCLIP20.41■□□□□ 0.86
USP53-208ENST00000514305 SEPT10Q9P0V9 454 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 TRHDEQ9UKU6 1024 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 SCML1Q9UN30 329 aa20.41■□□□□ 0.86
USP53-208ENST00000514305 FCF1Q9Y324 198 aaKnown RBP20.41■□□□□ 0.86
USP53-208ENST00000514305 MUC22E2RYF6 1773 aaPredicted RBP20.4■□□□□ 0.86
USP53-208ENST00000514305 C1QTNF3-AMACRE9PGA6 284 aa20.4■□□□□ 0.86
USP53-208ENST00000514305 BNIP3LO60238 219 aa20.4■□□□□ 0.86
USP53-208ENST00000514305 PRNPP04156 253 aa20.4■□□□□ 0.86
USP53-208ENST00000514305 CSNK1DP48730 415 aa20.4■□□□□ 0.86
USP53-208ENST00000514305 IFI35P80217 286 aaPredicted RBP20.4■□□□□ 0.86
USP53-208ENST00000514305 ZBTB16Q05516 673 aa20.4■□□□□ 0.86
USP53-208ENST00000514305 ITKQ08881 620 aa20.4■□□□□ 0.86
USP53-208ENST00000514305 PRKD1Q15139 912 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms