RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 RNF219Q5W0B1 726 aaPredicted RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 FSTL4Q6MZW2 842 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 CGB2Q6NT52 195 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ESRP1Q6NXG1 681 aaKnown RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 CDHR3Q6ZTQ4 885 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SPATA31D4Q6ZUB0 917 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SPATA21Q7Z572 469 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 CCDC91Q7Z6B0 441 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 CLEC14AQ86T13 490 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ZC3HC1Q86WB0 502 aaKnown RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 C7orf61Q8IZ16 206 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 NDUFAF2Q8N183 169 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ZNF557Q8N988 423 aaPredicted RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 DCAF4L2Q8NA75 395 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 C2CD4AQ8NCU7 369 aaPredicted RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 GPR150Q8NGU9 434 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 FIBINQ8TAL6 211 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 BRSK1Q8TDC3 778 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ACDQ96AP0 544 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 IFT43Q96FT9 208 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ZNF778Q96MU6 729 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 FAM111AQ96PZ2 611 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ELAC2Q9BQ52 826 aaKnown RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 FEM1AQ9BSK4 669 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SPON2Q9BUD6 331 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 HTATIP2Q9BUP3 242 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SLC46A2Q9BY10 475 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 PITPNM3Q9BZ71 974 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ATXN3LQ9H3M9 355 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 KDM4CQ9H3R0 1056 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 RABEP2Q9H5N1 569 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 TASP1Q9H6P5 420 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 TRPC7Q9HCX4 862 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 IARS2Q9NSE4 1012 aaKnown RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 FGFR1OP2Q9NVK5 253 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ZDHHC7Q9NXF8 308 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 PHTF1Q9UMS5 762 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ANKRD6Q9Y2G4 727 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ARL2BPQ9Y2Y0 163 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SH3BP1Q9Y3L3 701 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 USP15Q9Y4E8 981 aaPredicted RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 HIDE1A8MVS5 230 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 H0Y626 953 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 LEFTY2O00292 366 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 LDB2O43679 373 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 TSPAN3O60637 253 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 CLASP2O75122 1294 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 MOSPD3O75425 235 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 CKMP06732 381 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 BPGMP07738 259 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 MYL4P12829 197 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 HOXB8P17481 243 aaPredicted RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 TYK2P29597 1187 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 CHRNA4P43681 627 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 LEPRP48357 1165 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 ERVK-21P61565 698 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 PPARDQ03181 441 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 CCDC15Q0P6D6 951 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 THOC5Q13769 683 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 CAMK1Q14012 370 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 CNGA3Q16281 694 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 PCSK7Q16549 785 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 CCDC153Q494R4 210 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 ARHGAP15Q53QZ3 475 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 PRSS36Q5K4E3 855 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 SPDYAQ5MJ70 313 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 ATG16L1Q676U5 607 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 RETSATQ6NUM9 610 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 NEPROQ6NW34 567 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 NCEH1Q6PIU2 408 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 ELMSAN1Q6PJG2 1045 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 DCLK2Q8N568 766 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 MAB21L3Q8N8X9 362 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 TDRD5Q8NAT2 981 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 SHKBP1Q8TBC3 707 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 STYXQ8WUJ0 223 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 USP13Q92995 863 aaPredicted RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 VPS39Q96JC1 886 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 LMLNQ96KR4 655 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 C7orf26Q96N11 449 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 AGAP2Q99490 1192 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 PAIP2Q9BPZ3 127 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 CORO1BQ9BR76 489 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 TDRD1Q9BXT4 1180 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 MFSD1Q9H3U5 465 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 ALG13Q9NP73 1137 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 SNX15Q9NRS6 342 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 PCMTD2Q9NV79 361 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 SMPD4Q9NXE4 827 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 KIAA1522Q9P206 1035 aaPredicted RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 CFAP97Q9P2B7 532 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 KLHL14Q9P2G3 628 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 SLC17A6Q9P2U8 582 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 LHX3Q9UBR4 397 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 MID2Q9UJV3 735 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 EMCNQ9ULC0 261 aa8.44□□□□□ -1.06
RNF4-220ENST00000513578 CORO1CQ9ULV4 474 aaPredicted RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 MTO1Q9Y2Z2 717 aaKnown RBP8.44□□□□□ -1.06
RNF4-220ENST00000513578 SCN8AQ9UQD0 1980 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms