RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ADAMTS3O15072 1205 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 MMP8P22894 467 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 BNC1Q01954 994 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 ELAVL2Q12926 359 aaKnown RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 ZNF177Q13360 481 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 TMEM132BQ14DG7 1078 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 DENND5AQ6IQ26 1287 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 FAM126BQ8IXS8 530 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 KBTBD8Q8NFY9 601 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 HELQQ8TDG4 1101 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 TINF2Q9BSI4 451 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 UBP1Q9NZI7 540 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 MORF4L1Q9UBU8 362 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 WBP11Q9Y2W2 641 aaKnown RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 CNTNAP2Q9UHC6 1331 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 LOC100506127A0A0U1RQW1 187 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 SH3PXD2BA1X283 911 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 CARNS1A5YM72 827 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 EFCAB10A6NFE3 127 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 CCNT2O60583 730 aaKnown RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 LGALS2P05162 132 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 PORP16435 677 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 ITGAXP20702 1163 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 DNAJB2P25686 324 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 TRAP1Q12931 704 aaKnown RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 CARTPTQ16568 116 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 ZACNQ401N2 412 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 SGO1Q5FBB7 561 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 TMEM53Q6P2H8 277 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 GK5Q6ZS86 529 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 MON1BQ7L1V2 547 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 CMC1Q7Z7K0 106 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 DCAKDQ8WVC6 231 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 GPR63Q9BZJ6 419 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 NUDT5Q9UKK9 219 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 PCDHGC3Q9UN70 934 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 TIMM13Q9Y5L4 95 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 A0A087X1B8 175 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 RBM47A0AV96 593 aaKnown RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 TYROBPO43914 113 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 MICAL2O94851 1124 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 ZNF143P52747 638 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 CDK18Q07002 472 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 RALGDSQ12967 914 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 BNIP3Q12983 259 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 NOMO1Q15155 1222 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 MOGQ16653 247 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 CCNYL2Q5T2Q4 361 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 RELL1Q8IUW5 271 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 BRSK2Q8IWQ3 736 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 DNAJB14Q8TBM8 379 aa11.34□□□□□ -0.59
TCOF1-211ENST00000513346 HOPXQ9BPY8 73 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-211ENST00000513346 AHDC1Q5TGY3 1603 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 FAM95CA0A1B0GW59 222 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 NFKBIEO00221 500 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 USP12O75317 370 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 FBXO21O94952 628 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 POLR2EP19388 210 aaKnown RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 BCAP31P51572 246 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 POU6F1Q14863 301 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 TRIQKQ629K1 86 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 CENPSQ8N2Z9 138 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 CLEC4MQ9H2X3 399 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 RMND5AQ9H871 391 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 DDX43Q9NXZ2 648 aaKnown RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 TRPM5Q9NZQ8 1165 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 KANSL3Q9P2N6 904 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 CRNNQ9UBG3 495 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 DPP7Q9UHL4 492 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 PCDHB12Q9Y5F1 795 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 YDJCA8MPS7 323 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 KCNK1O00180 336 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 BEX3Q00994 111 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 BST2Q10589 180 aaKnown RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 OVOS1Q6IE37 1185 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 THAP5Q7Z6K1 395 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 KLRG1Q96E93 195 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 SYTL2Q9HCH5 934 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 LTBP3Q9NS15 1303 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 PRR23AA6NEV1 266 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 F5H5T6 163 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 CD3EAPO15446 510 aaKnown RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 EGFRP00533 1210 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 NDST1P52848 882 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 PPM1LQ5SGD2 360 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 SPESP1Q6UW49 350 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 SH3BP5LQ7L8J4 393 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 MARVELD2Q8N4S9 558 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 OR52K1Q8NGK4 314 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 COPS5Q92905 334 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 CENPNQ96H22 339 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-211ENST00000513346 FICDQ9BVA6 458 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 MARCH7Q9H992 704 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 TMEM39AQ9NV64 488 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 TRHDEQ9UKU6 1024 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms