RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 C2orf40Q9H1Z8 148 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 MTG2Q9H4K7 406 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ECT2Q9H8V3 914 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 SH3GLB2Q9NR46 395 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 TOPORSQ9NS56 1045 aaPredicted RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 ANKEF1Q9NU02 776 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 CACNG4Q9UBN1 327 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 IL17BQ9UHF5 180 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 MCM8Q9UJA3 840 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 YIPF1Q9Y548 306 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 TEP1Q99973 2627 aaKnown RBP3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 DENND4CQ5VZ89 1909 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 KIAA1549LQ6ZVL6 1849 aa3.93□□□□□ -1.78
PDLIM5-218ENST00000513341 MYO16Q9Y6X6 1858 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 SPTAN1Q13813 2472 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 MYMKA6NI61 221 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 OR6C75A6NL08 312 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 K7EQS6 105 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 M0QZQ0 153 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 FLRT2O43155 660 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 B4GALT5O43286 388 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ZBTB43O43298 467 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 TNFSF14O43557 240 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 SLITRK3O94933 977 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PRAMEF12O95522 483 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PRKCBP05771 671 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 HMGB1P09429 215 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 GP1BBP13224 206 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 KCNE1P15382 129 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 GLRA2P23416 452 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PTGER1P34995 402 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ACTN2P35609 894 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 HNF1BP35680 557 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 EIF2DP41214 584 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 TNFRSF4P43489 277 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 SSBP2P81877 361 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 YWHAHQ04917 246 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ADCY2Q08462 1091 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 FAPQ12884 760 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 BFSP1Q12934 665 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PRPF4BQ13523 1007 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 CAPSQ13938 189 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PLEKHG6Q3KR16 790 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 STXBP5Q5T5C0 1151 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ARMCX5Q6P1M9 558 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 APOA5Q6Q788 366 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 MON1AQ86VX9 555 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 CDR2LQ86X02 465 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 MICU3Q86XE3 530 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ZBTB8OSQ8IWT0 167 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ZZZ3Q8IYH5 903 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ETNPPLQ8TBG4 499 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 TBCKQ8TEA7 893 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 SETD7Q8WTS6 366 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 C2orf15Q8WU43 125 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 LEO1Q8WVC0 666 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 SNRNP27Q8WVK2 155 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 DNASE2BQ8WZ79 361 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 USP13Q92995 863 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 USP7Q93009 1102 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ATP2A3Q93084 1043 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 MED8Q96G25 268 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 Q96MF0 132 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 CAMK1GQ96NX5 476 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 GCNAQ96QF7 691 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 TTC1Q99614 292 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 TIMP4Q99727 224 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ALOXE3Q9BYJ1 711 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 KLK15Q9H2R5 256 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PCIF1Q9H4Z3 704 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PDZD7Q9H5P4 517 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 XPNPEP1Q9NQW7 623 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 PCDHGA1Q9Y5H4 931 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ARID2Q68CP9 1835 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 FLNCQ14315 2725 aa3.92□□□□□ -1.78
PDLIM5-218ENST00000513341 ANKRD17O75179 2603 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 NID2Q14112 1375 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 A0A1B0GTW7 788 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 I3L4J1 428 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 PODXLO00592 558 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 SLC28A2O43868 658 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 DFNA5O60443 496 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 BAG4O95429 457 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 VNN2O95498 520 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 NFATC1O95644 943 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 CER1O95813 267 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 ATXN1LP0C7T5 689 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 JUPP14923 745 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 WT1P19544 449 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TYMPP19971 482 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 ADSSP30520 456 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 LSSP48449 732 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 EFNA5P52803 228 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TLE3Q04726 772 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 DUSP2Q05923 314 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 VEPH1Q14D04 833 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 PPP2R5AQ15172 486 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TAF12Q16514 161 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 GALNT17Q6IS24 598 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 246.8 ms