RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 INSCQ1MX18 579 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 FKBP9P1Q75LS8 142 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 PTGR2Q8N8N7 351 aaPredicted RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 TMEM40Q8WWA1 233 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 CCDC134Q9H6E4 229 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 CCDC167Q9P0B6 97 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 ZNF510Q9Y2H8 683 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 CAPN15O75808 1086 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 USP1O94782 785 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 CYP2A7P20853 494 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 FASTKQ14296 549 aaKnown RBP13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 SPDYE7PQ495Y7 208 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 FNDC3BQ53EP0 1204 aaKnown RBP13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 NCBP2-AS2Q69YL0 99 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 TRMT10BQ6PF06 316 aaKnown RBP13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 RHBDF2Q6PJF5 856 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 MILR1Q7Z6M3 343 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 SNX32Q86XE0 403 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 SPATA6LQ8N4H0 392 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 PSMG2Q969U7 264 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 CNDP1Q96KN2 507 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 FAM126AQ9BYI3 521 aaPredicted RBP13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 TNPO3Q9Y5L0 923 aaKnown RBP13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 SLC38A8A6NNN8 435 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 SHOX2O60902 331 aaPredicted RBP13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 CTPS1P17812 591 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 ATP6AP1LQ52LC2 224 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 INPP5DQ92835 1189 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 HMCESQ96FZ2 354 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 PARVBQ9HBI1 364 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 EIF2B3Q9NR50 452 aaKnown RBP13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 CREBZFQ9NS37 354 aa13.21□□□□□ -0.3
PCDHA4-202ENST00000512229 ZBTB14O43829 449 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 FKBP6O75344 327 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 MLLT6P55198 1093 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 GPR158Q5T848 1215 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 LIPMQ5VYY2 423 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 TRMT11Q7Z4G4 463 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 CLEC4FQ8N1N0 589 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 FNDC5Q8NAU1 212 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 SMG8Q8ND04 991 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 OR6K2Q8NGY2 324 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 KIF17Q9P2E2 1029 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 RAP2CQ9Y3L5 183 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 TLL2Q9Y6L7 1015 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 MYH4Q9Y623 1939 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 A0A1W2PQ45 241 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 A0A1W2PQY0 241 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 PROCP04070 461 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 SLC2A4P14672 509 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 MAPK1P28482 360 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 HCAR3P49019 387 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 CDH4P55283 916 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 CYTH1Q15438 398 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 SYTL1Q8IYJ3 562 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 OR4K2Q8NGD2 314 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 RDH11Q8TC12 318 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 PIWIL1Q96J94 861 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 PTPN18Q99952 460 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 C12orf65Q9H3J6 166 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 OSGEPL1Q9H4B0 414 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 COG4Q9H9E3 785 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 ARL15Q9NXU5 204 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 GNEQ9Y223 722 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 V9GYQ6 96 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 TCRBV7S3A2A0A539 114 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 PPIDQ08752 370 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 MPPE1Q53F39 396 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 SETMARQ53H47 684 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 WASHC2DQ5SRD0 308 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 MORN1Q5T089 497 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 CIR1Q86X95 450 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 JADE3Q92613 823 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 CASP10Q92851 521 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 TBATAQ96M53 351 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 SEMA4BQ9NPR2 832 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 OPTCQ9UBM4 332 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 FETUBQ9UGM5 382 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 FAF1Q9UNN5 650 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 DOLKQ9UPQ8 538 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 ARIH1Q9Y4X5 557 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 SNX5Q9Y5X3 404 aa13.2□□□□□ -0.3
PCDHA4-202ENST00000512229 MBLAC1A4D2B0 266 aaPredicted RBP13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 C5orf58C9J3I9 102 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 TCEA3O75764 348 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 VCLP18206 1134 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 IL10RBQ08334 325 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 LRRC74AQ0VAA2 488 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 ESRP1Q6NXG1 681 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 CACUL1Q86Y37 369 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 CYP4X1Q8N118 509 aa13.19□□□□□ -0.3
PCDHA4-202ENST00000512229 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms