RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 PRR23AA6NEV1 266 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 TBKBP1A7MCY6 615 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 TBX10O75333 385 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 GCATO75600 419 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 LRIG2O94898 1065 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 DLGAP3O95886 979 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 F7P08709 466 aaPredicted RBP8.12□□□□□ -1.11
NEK1-208ENST00000512193 SP100P23497 879 aaPredicted RBP8.12□□□□□ -1.11
NEK1-208ENST00000512193 PTPN9P43378 593 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 GPX6P59796 221 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 DCTN2Q13561 401 aaKnown RBP8.12□□□□□ -1.11
NEK1-208ENST00000512193 MAPK11Q15759 364 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 FBXO48Q5FWF7 155 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 ARPINQ7Z6K5 226 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 FAM156AQ8NDB6 213 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 RTKNQ9BST9 563 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 MINDY3Q9H8M7 445 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 POLR1BQ9H9Y6 1135 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 ZFP14Q9HCL3 533 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 PTCH2Q9Y6C5 1203 aa8.12□□□□□ -1.11
NEK1-208ENST00000512193 CNTNAP1P78357 1384 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 AZIN1O14977 448 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 TIPRLO75663 272 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 AP2A1O95782 977 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 STAU1O95793 577 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 FGFR1P11362 822 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 VCLP18206 1134 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 PEX2P28328 305 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 MAPK1P28482 360 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 S100A3P33764 101 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 LIMK2P53671 638 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 NR1H2P55055 460 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 DEFA1P59665 94 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 DEFA3P59666 94 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ELAVL2Q12926 359 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 DGCR6Q14129 220 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 GALNT3Q14435 633 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 DUSP28Q4G0W2 176 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 FAM45BPQ6NSW5 357 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ESRP1Q6NXG1 681 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 ZNF621Q6ZSS3 439 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 CUZD1Q86UP6 607 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 CLYBLQ8N0X4 340 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 EID3Q8N140 333 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 PPTC7Q8NI37 304 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 FAM45AQ8TCE6 357 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 DDX1Q92499 740 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 CIB1Q99828 191 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 KLHL25Q9H0H3 589 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 OPTCQ9UBM4 332 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 SLIT2O94813 1529 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 SMIM31A0A1B0GVY4 71 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 TRAFD1O14545 582 aaPredicted RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 TREHO43280 583 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 NRP2O60462 931 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 OR4Q2P0C623 313 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 CRYBB1P53674 252 aaPredicted RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 CDK18Q07002 472 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 STARD3Q14849 445 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 TIGD2Q4W5G0 525 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 CCDC103Q8IW40 242 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 FAM9CQ8IZT9 166 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ZCCHC7Q8N3Z6 543 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 TOP6BLQ8N6T0 577 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 RDH11Q8TC12 318 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 CD101Q93033 1021 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 PTCD3Q96EY7 689 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 RIBC2Q9H4K1 309 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 NKX1-2Q9UD57 310 aaPredicted RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 ZNHIT2Q9UHR6 403 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 INVSQ9Y283 1065 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 TSC22D4Q9Y3Q8 395 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 MYH6P13533 1939 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 PTPRJQ12913 1337 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 DHRS12A0PJE2 317 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 MYBPHLA2RUH7 354 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 KCNU1A8MYU2 1149 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ARHGEF9O43307 516 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 GRIN3BO60391 1043 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 USP2O75604 605 aaPredicted RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 ATG7O95352 703 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 EPB42P16452 691 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ECHS1P30084 290 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 LILRA4P59901 499 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 MRPS6P82932 125 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 HSPA14Q0VDF9 509 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ZNF460Q14592 562 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ZNF284Q2VY69 593 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 MTX3Q5HYI7 312 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 SPESP1Q6UW49 350 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 BBS7Q8IWZ6 715 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 RAB42Q8N4Z0 105 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 ZNF276Q8N554 614 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 DCBLD1Q8N8Z6 715 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 DCAKDQ8WVC6 231 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 TPD52L3Q96J77 140 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 UGT2B28Q9BY64 529 aa8.11□□□□□ -1.11
NEK1-208ENST00000512193 NOL11Q9H8H0 719 aaKnown RBP8.11□□□□□ -1.11
NEK1-208ENST00000512193 ARL15Q9NXU5 204 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms