RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 HORMAD1Q86X24 394 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 LZTR1Q8N653 840 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 DEFB124Q8NES8 71 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 CASKIN2Q8WXE0 1202 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 FUBP1Q96AE4 644 aaKnown RBP13.72□□□□□ -0.21
SNF8-206ENST00000509989 CINPQ9BW66 212 aaPredicted RBP13.72□□□□□ -0.21
SNF8-206ENST00000509989 GAREM1Q9H706 876 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 PREBQ9HCU5 417 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 DYRK4Q9NR20 520 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 DTLQ9NZJ0 730 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 RCOR3Q9P2K3 495 aaPredicted RBP13.72□□□□□ -0.21
SNF8-206ENST00000509989 SAE1Q9UBE0 346 aaPredicted RBP13.72□□□□□ -0.21
SNF8-206ENST00000509989 COQ6Q9Y2Z9 468 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 GOLGA8CPA6NN73 597 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 MMP20O60882 483 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 PAK4O96013 591 aaPredicted RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 GARSP41250 739 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 DPP6P42658 865 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 GRIA4P48058 902 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 SCNN1BP51168 640 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 AFF3P51826 1226 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 DYNLT1P63172 113 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 RACK1P63244 317 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 SFSWAPQ12872 951 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 PPM1JQ5JR12 505 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 TMCO4Q5TGY1 634 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 NAPEPLDQ6IQ20 393 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 AADACL2Q6P093 401 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 GCNT7Q6ZNI0 430 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 PRPF39Q86UA1 669 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 ATPAF2Q8N5M1 289 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 BMFQ96LC9 184 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 PSKH2Q96QS6 385 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 LGMNQ99538 433 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 KLF6Q99612 283 aaPredicted RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 WRAP53Q9BUR4 548 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 CEP41Q9BYV8 373 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 CPEB1Q9BZB8 566 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 KDM4CQ9H3R0 1056 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 SUV39H2Q9H5I1 410 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 NOD2Q9HC29 1040 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
SNF8-206ENST00000509989 BTBD3Q9Y2F9 522 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 PCDHGC4Q9Y5F7 938 aa13.71□□□□□ -0.21
SNF8-206ENST00000509989 LRP4O75096 1905 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 TSPAN11A1L157 253 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 GRID2IPA4D2P6 1211 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 POM121BA6NF01 834 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 A8MX80 341 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 TRAFD1O14545 582 aaPredicted RBP13.7□□□□□ -0.22
SNF8-206ENST00000509989 VILLO15195 856 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 PJA2O43164 708 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 SPOPO43791 374 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 SH3BP5O60239 455 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
SNF8-206ENST00000509989 KCNK5O95279 499 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 SYPP08247 313 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 PECAM1P16284 738 aaPredicted RBP13.7□□□□□ -0.22
SNF8-206ENST00000509989 CD38P28907 300 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 CDKN2BP42772 138 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 VAV2P52735 878 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 DSC2Q02487 901 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 TRAF2Q12933 501 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 ZBTB17Q13105 803 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 TAZQ16635 292 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 SLC9A4Q6AI14 798 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 PSAPL1Q6NUJ1 521 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 RABEPKQ7Z6M1 372 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 PIP4P1Q86T03 277 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 TTC7BQ86TV6 843 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 GATAD2AQ86YP4 633 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 RFX6Q8HWS3 928 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 TMEM145Q8NBT3 493 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 LRIG1Q96JA1 1093 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 NT5MQ9NPB1 228 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 PCDH12Q9NPG4 1184 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 IMPACTQ9P2X3 320 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 SEPT3Q9UH03 358 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 HEY1Q9Y5J3 304 aa13.7□□□□□ -0.22
SNF8-206ENST00000509989 A0A0A6YYK5 440 aaPredicted RBP13.69□□□□□ -0.22
SNF8-206ENST00000509989 SPAARA0A1B0GVQ0 90 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 KCNK1O00180 336 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 AP1G1O43747 822 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 OPHN1O60890 802 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 TOP3BO95985 862 aaKnown RBP13.69□□□□□ -0.22
SNF8-206ENST00000509989 HLA-DQB2P05538 268 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 GM2AP17900 193 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 SERPINB6P35237 376 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 SLC1A1P43005 524 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 MMP13P45452 471 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 CSNK1DP48730 415 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
SNF8-206ENST00000509989 NXPH1P58417 271 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 NIPAL4Q0D2K0 466 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 RALGDSQ12967 914 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 BNIP3Q12983 259 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 ZNF235Q14590 738 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 N4BP2L1Q5TBK1 243 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms