RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 STC2O76061 302 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 UPP2O95045 317 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 SEC24AO95486 1093 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 CRTAMO95727 393 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 TIMP1P01033 207 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 PENKP01210 267 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 PRKCGP05129 697 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 RHOCP08134 193 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 RBP1P09455 135 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 ATXN1LP0C7T5 689 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 SLC35E2BP0CK96 405 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 T-ENOLP0DO92 83 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 OGNP20774 298 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 ARNTP27540 789 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 HOXD9P28356 352 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 CORO1AP31146 461 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 SLC1A2P43004 574 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 MNX1P50219 401 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 KCNQ1P51787 676 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 ATN1P54259 1190 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 AQP5P55064 265 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 DNAJB13P59910 316 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 PRAMEP78395 509 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 DSC2Q02487 901 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 PCSK7Q16549 785 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 FAM83EQ2M2I3 478 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 INO80DQ53TQ3 878 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 PPM1JQ5JR12 505 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 SIRPB2Q5JXA9 342 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 AGAP9Q5VTM2 703 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 ZNF470Q6ECI4 717 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 MRNIPQ6NTE8 343 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 C16orf46Q6P387 395 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 KLC3Q6P597 504 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 RTL10Q7L3V2 364 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 CMC1Q7Z7K0 106 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 C10orf107Q8IVU9 208 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 TMEM199Q8N511 208 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 HJURPQ8NCD3 748 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 TTC8Q8TAM2 541 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 BRSK1Q8TDC3 778 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 STYXQ8WUJ0 223 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 PTCD3Q96EY7 689 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 THOC1Q96FV9 657 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 ZNF778Q96MU6 729 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 SEMA3CQ99985 751 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 CINPQ9BW66 212 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 C1QTNF1Q9BXJ1 281 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 MRPL46Q9H2W6 279 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 TASP1Q9H6P5 420 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 MRPL17Q9NRX2 175 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.32□□□□□ -0.92
HTT-205ENST00000509043 HCSTQ9UBK5 93 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 VTI1BQ9UEU0 232 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 HAO1Q9UJM8 370 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 ZFP37Q9Y6Q3 630 aaPredicted RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 CCDC195A0A1B0GUA6 201 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 KIAA0355O15063 1070 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 SLC22A2O15244 555 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 NPHS1O60500 1241 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 RPP40O75818 363 aaKnown RBP9.31□□□□□ -0.92
HTT-205ENST00000509043 ATP6V1G2O95670 118 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 FGF19O95750 216 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 HSPA4LO95757 839 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 OLFM2O95897 454 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 C1RP00736 705 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
HTT-205ENST00000509043 ESRRAP11474 423 aaPredicted RBP9.31□□□□□ -0.92
HTT-205ENST00000509043 AOC1P19801 751 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 CCND1P24385 295 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 TARSP26639 723 aaKnown RBP9.31□□□□□ -0.92
HTT-205ENST00000509043 GABRB3P28472 473 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 SLC6A4P31645 630 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 ACVRL1P37023 503 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 NAA20P61599 178 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 KCNJ2P63252 427 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 PRKAA1Q13131 559 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 ITGA9Q13797 1035 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 FSCBQ5H9T9 825 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 WASHC2DQ5SRD0 308 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 MPP7Q5T2T1 576 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 IL31Q6EBC2 164 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 FAM45BPQ6NSW5 357 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 CCDC149Q6ZUS6 474 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 PIWIL4Q7Z3Z4 852 aaKnown RBP9.31□□□□□ -0.92
HTT-205ENST00000509043 SDCCAG8Q86SQ7 713 aaPredicted RBP9.31□□□□□ -0.92
HTT-205ENST00000509043 CILP2Q8IUL8 1156 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 DENND1CQ8IV53 801 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 MFN1Q8IWA4 741 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 FAM217AQ8IXS0 508 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 PGBD5Q8N414 524 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 SLC25A41Q8N5S1 370 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 OR13J1Q8NGT2 312 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 FAM45AQ8TCE6 357 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 SLC7A6OSQ96CW6 309 aaPredicted RBP9.31□□□□□ -0.92
HTT-205ENST00000509043 ELMO2Q96JJ3 720 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 RILPQ96NA2 401 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 KLHL5Q96PQ7 755 aa9.31□□□□□ -0.92
HTT-205ENST00000509043 NUDCD1Q96RS6 583 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms