RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 MT-CO3P00414 261 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 GIMD1P0DJR0 217 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 TACR2P21452 398 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 ACADSBP45954 432 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 FMO5P49326 533 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 STK19P49842 368 aaPredicted RBP8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 LIG3P49916 1009 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 METAP1P53582 386 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 PMS1P54277 932 aaKnown RBP8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 KRT85P78386 507 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 LRMPQ12912 555 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 STAT4Q14765 748 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 DCAF17Q5H9S7 520 aaPredicted RBP8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 MEI1Q5TIA1 1274 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 AGBL4Q5VU57 503 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 FAM46CQ5VWP2 391 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 RNF219Q5W0B1 726 aaPredicted RBP8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 ZNF605Q86T29 641 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 TMEM110Q86TL2 294 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 TAC4Q86UU9 113 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 SPACA3Q8IXA5 215 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 LGI2Q8N0V4 545 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 TMEM145Q8NBT3 493 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 ALG14Q96F25 216 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 HIC2Q96JB3 615 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 PRMT1Q99873 361 aaKnown RBP8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 MIS12Q9H081 205 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 GOLPH3LQ9H4A5 285 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 KLHL11Q9NVR0 708 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 ARMCX3Q9UH62 379 aaPredicted RBP8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 CNTN6Q9UQ52 1028 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 ZDHHC9Q9Y397 364 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 MYO18BQ8IUG5 2567 aa8.84□□□□□ -0.99
COL4A3BP-206ENST00000508809 PRAMEF27A3QJZ7 478 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 MCF2LO15068 1137 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 P4HA2O15460 535 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 RTN2O75298 545 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 APOEP02649 317 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 CKMT1AP12532 417 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 VAV1P15498 845 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 DGKAP23743 735 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 MAT2AP31153 395 aaKnown RBP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 OXCT1P55809 520 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 TAS2R38P59533 333 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 GCNT1Q02742 428 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 CFHR1Q03591 330 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 CCDC173Q0VFZ6 552 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 CNTN1Q12860 1018 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 MEA1Q16626 185 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 MSMPQ1L6U9 139 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 ZBTB37Q5TC79 503 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 ZNF658Q5TYW1 1059 aaPredicted RBP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 RAP1GAP2Q684P5 730 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 CXorf57Q6NSI4 855 aaKnown RBP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 NEK5Q6P3R8 708 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 DSG4Q86SJ6 1040 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 SHISA5Q8N114 240 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 CCAR2Q8N163 923 aaKnown RBP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 ZNF248Q8NDW4 579 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 OR4C6Q8NH72 309 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 SPATA20Q8TB22 786 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 SNRNP27Q8WVK2 155 aaKnown RBP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 OR8D1Q8WZ84 308 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 KAT5Q92993 513 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 ZNF578Q96N58 590 aaPredicted RBP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 NT5C1BQ96P26 610 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 GSDMAQ96QA5 445 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 PPP1R9BQ96SB3 815 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 TSG101Q99816 390 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 TRIM62Q9BVG3 475 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 METTL14Q9HCE5 456 aaKnown RBP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.83□□□□□ -1
COL4A3BP-206ENST00000508809 RMND1Q9NWS8 449 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 TJP2Q9UDY2 1190 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 CEP83Q9Y592 693 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 OR51B4Q9Y5P0 310 aa8.83□□□□□ -1
COL4A3BP-206ENST00000508809 BOD1L1Q8NFC6 3051 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 AHCTF1Q8WYP5 2266 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 A0A1B0GVM2 712 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 TCAF2A6NFQ2 919 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 F5H5T6 163 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 ALOX15BO15296 676 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 OPA1O60313 960 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 TRUB2O95900 331 aaKnown RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 MOCS2O96007 188 aaPredicted RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 CALCAP01258 141 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 HSP90AA1P07900 732 aaKnown RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 PDGFRAP16234 1089 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 LSSP48449 732 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 GP2P55259 537 aaKnown RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 ERVPABLB-1P60509 514 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 YWHAZP63104 245 aaKnown RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 LRRC63Q05C16 580 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 PNOCQ13519 176 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 DLG2Q15700 870 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 SETMARQ53H47 684 aaPredicted RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 FBXL22Q6P050 247 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 CHSY1Q86X52 802 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 HSCBQ8IWL3 235 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 LSMEM2Q8N112 164 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms