RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 XPAP23025 273 aaPredicted RBP24.4■■□□□ 1.5
SRPK1-210ENST00000508473 FOXC1Q12948 553 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 SUZ12Q15022 739 aaKnown RBP24.4■■□□□ 1.5
SRPK1-210ENST00000508473 TRIP6Q15654 476 aaKnown RBP24.4■■□□□ 1.5
SRPK1-210ENST00000508473 IQCHQ86VS3 1027 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 GATAD2AQ86YP4 633 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 PCDH19Q8TAB3 1148 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 RHBDD1Q8TEB9 315 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 DKK3Q9UBP4 350 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 PCOLCE2Q9UKZ9 415 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 CABIN1Q9Y6J0 2220 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 TMEM131Q92545 1883 aa24.4■■□□□ 1.5
SRPK1-210ENST00000508473 TTC24A2A3L6 582 aaPredicted RBP24.39■■□□□ 1.49
SRPK1-210ENST00000508473 AREL1O15033 823 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 RAD51BO15315 384 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 FLRT2O43155 660 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 MFSD11O43934 449 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 DFNA5O60443 496 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 MAFKO60675 156 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 MTA2O94776 668 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 THEGLP0DJG4 465 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 PMLP29590 882 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 MAGEA1P43355 309 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 SCNN1BP51168 640 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 SGCGQ13326 291 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 ZNF235Q14590 738 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 PDK2Q15119 407 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 SHBQ15464 509 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 ANKRD20A8PQ5CZ79 823 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 CFAP58Q5T655 872 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 NCBP2-AS2Q69YL0 99 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 DBX2Q6ZNG2 339 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 GCNT7Q6ZNI0 430 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 RAPGEF5Q92565 580 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 ZNF599Q96NL3 588 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 ZNF670Q9BS34 389 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 INTUQ9ULD6 942 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 HYOU1Q9Y4L1 999 aa24.39■■□□□ 1.49
SRPK1-210ENST00000508473 PCDHGA12O60330 932 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 MAGEC1O60732 1142 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 MMP20O60882 483 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 CBFA2T3O75081 653 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 MAP3K6O95382 1288 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 PEX11BO96011 259 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 PRKCGP05129 697 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 ARHGAP25P42331 645 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 CSNK1DP48730 415 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 OVGP1Q12889 678 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 HNRNPDQ14103 355 aaKnown RBP24.38■■□□□ 1.49
SRPK1-210ENST00000508473 GRM3Q14832 879 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 ZSWIM9Q86XI8 627 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 MAP7D3Q8IWC1 876 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 OR13H1Q8NG92 308 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 ZNF641Q96N77 438 aaPredicted RBP24.38■■□□□ 1.49
SRPK1-210ENST00000508473 PSKH2Q96QS6 385 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 TUBGCP5Q96RT8 1024 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 WRAP53Q9BUR4 548 aaKnown RBP24.38■■□□□ 1.49
SRPK1-210ENST00000508473 C1QTNF2Q9BXJ5 285 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 ATP13A3Q9H7F0 1226 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 TFR2Q9UP52 801 aa24.38■■□□□ 1.49
SRPK1-210ENST00000508473 TNNT1P13805 278 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 RENBPP51606 427 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 SEMG2Q02383 582 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 NSUN2Q08J23 767 aaKnown RBP eCLIP24.37■■□□□ 1.49
SRPK1-210ENST00000508473 PAF1Q8N7H5 531 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 CXorf40AQ8TE69 158 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 NSMCE1Q8WV22 266 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 BMFQ96LC9 184 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 NSMCE3Q96MG7 304 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 TRPM6Q9BX84 2022 aa24.37■■□□□ 1.49
SRPK1-210ENST00000508473 TSPAN11A1L157 253 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 LRRD1A4D1F6 860 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 POM121BA6NF01 834 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 TOP3BO95985 862 aaKnown RBP24.36■■□□□ 1.49
SRPK1-210ENST00000508473 ITGAVP06756 1048 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 KDELR1P24390 212 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 SERPINA4P29622 427 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 NOP2P46087 812 aaKnown RBP24.36■■□□□ 1.49
SRPK1-210ENST00000508473 ARRB1P49407 418 aaPredicted RBP24.36■■□□□ 1.49
SRPK1-210ENST00000508473 BCL2L1Q07817 233 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 BNIP3Q12983 259 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 PAFAH1B3Q15102 231 aaKnown RBP24.36■■□□□ 1.49
SRPK1-210ENST00000508473 UGP2Q16851 508 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 KDM7AQ6ZMT4 941 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 Q6ZSR6 202 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 PTAR1Q7Z6K3 402 aaPredicted RBP24.36■■□□□ 1.49
SRPK1-210ENST00000508473 ABI3BPQ7Z7G0 1075 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 PGBD5Q8N414 524 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 PQLC3Q8N755 202 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 HCAR2Q8TDS4 363 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 FAF2Q96CS3 445 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 ERVMER34-1Q9H9K5 563 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 PCDH12Q9NPG4 1184 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 PCDHA13Q9Y5I0 950 aa24.36■■□□□ 1.49
SRPK1-210ENST00000508473 SPINK2P20155 84 aa24.35■■□□□ 1.49
SRPK1-210ENST00000508473 MAXP61244 160 aa24.35■■□□□ 1.49
SRPK1-210ENST00000508473 SPA17Q15506 151 aa24.35■■□□□ 1.49
SRPK1-210ENST00000508473 BRAT1Q6PJG6 821 aa24.35■■□□□ 1.49
SRPK1-210ENST00000508473 ZSCAN30Q86W11 494 aa24.35■■□□□ 1.49
SRPK1-210ENST00000508473 CCDC170Q8IYT3 715 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms