RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PARS2Q7L3T8 475 aaKnown RBP15.17■□□□□ 0.02
RNF4-210ENST00000508235 TRIM69Q86WT6 500 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 TFB1MQ8WVM0 346 aaKnown RBP15.17■□□□□ 0.02
RNF4-210ENST00000508235 BIRC7Q96CA5 298 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 LGMNQ99538 433 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 FERMT1Q9BQL6 677 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 HEMGNQ9BXL5 484 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 SUV39H2Q9H5I1 410 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 NT5MQ9NPB1 228 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 SEMA4GQ9NTN9 838 aa15.17■□□□□ 0.02
RNF4-210ENST00000508235 KHNYNO15037 678 aaKnown RBP15.16■□□□□ 0.02
RNF4-210ENST00000508235 MUSKO15146 869 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 INSIG1O15503 277 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 TSPAN6O43657 245 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 SOCS5O75159 536 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 CR2P20023 1033 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 CA4P22748 312 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 NFKBIAP25963 317 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 MSNP26038 577 aaKnown RBP15.16■□□□□ 0.02
RNF4-210ENST00000508235 CD27P26842 260 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 TAS2R38P59533 333 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 IFI35P80217 286 aaPredicted RBP15.16■□□□□ 0.02
RNF4-210ENST00000508235 ITKQ08881 620 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 LLGL1Q15334 1064 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 RPS6KA1Q15418 735 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 MEI1Q5TIA1 1274 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 TTC7BQ86TV6 843 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 PRPF39Q86UA1 669 aaKnown RBP15.16■□□□□ 0.02
RNF4-210ENST00000508235 PGBD5Q8N414 524 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 C12orf50Q8NA57 414 aaPredicted RBP15.16■□□□□ 0.02
RNF4-210ENST00000508235 TTC13Q8NBP0 860 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 FEM1CQ96JP0 617 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 IL12RB2Q99665 862 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 KCNF1Q9H3M0 494 aa15.16■□□□□ 0.02
RNF4-210ENST00000508235 A0A1B0GTW7 788 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 A0A1W2PPC4 97 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 TSPAN11A1L157 253 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 RNF103O00237 685 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 NEMP1O14524 444 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 PCDH8O95206 1070 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 PIGNO95427 931 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 PECAM1P16284 738 aaPredicted RBP15.15■□□□□ 0.02
RNF4-210ENST00000508235 MAXP61244 160 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 RPS21P63220 83 aaKnown RBP15.15■□□□□ 0.02
RNF4-210ENST00000508235 ELP6Q0PNE2 266 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 PRKD1Q15139 912 aaPredicted RBP15.15■□□□□ 0.02
RNF4-210ENST00000508235 SEL1L2Q5TEA6 688 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 ALG1LQ6GMV1 187 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 KIAA1161Q6NSJ0 714 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 ERAP2Q6P179 960 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 ZC3H18Q86VM9 953 aaKnown RBP15.15■□□□□ 0.02
RNF4-210ENST00000508235 CAMK1DQ8IU85 385 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 DCLK2Q8N568 766 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 VOPP1Q96AW1 172 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 HAUS1Q96CS2 278 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 VAT1Q99536 393 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 SEMA3CQ99985 751 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 NUSAP1Q9BXS6 441 aaKnown RBP15.15■□□□□ 0.02
RNF4-210ENST00000508235 MIR1-1HGQ9H1L0 117 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 TMEM74BQ9NUR3 256 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 SAE1Q9UBE0 346 aaPredicted RBP15.15■□□□□ 0.02
RNF4-210ENST00000508235 EIF2B4Q9UI10 523 aaKnown RBP15.15■□□□□ 0.02
RNF4-210ENST00000508235 DMTF1Q9Y222 760 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 TTLL3Q9Y4R7 772 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 FADS3Q9Y5Q0 445 aa15.15■□□□□ 0.02
RNF4-210ENST00000508235 UPK3BL1B0FP48 263 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 C10orf142B7Z368 130 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 UPK3BL2E5RIL1 263 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 KCNK1O00180 336 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 BCAT2O15382 392 aaPredicted RBP15.14■□□□□ 0.01
RNF4-210ENST00000508235 LATO43561 262 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 RNGTTO60942 597 aaKnown RBP15.14■□□□□ 0.01
RNF4-210ENST00000508235 JCHAINP01591 159 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 CFIP05156 583 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 IGHV4-34P06331 123 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 SERPINF2P08697 491 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 MAOBP27338 520 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 LMNB2Q03252 620 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 ADCY2Q08462 1091 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 ZNF211Q13398 564 aaPredicted RBP15.14■□□□□ 0.01
RNF4-210ENST00000508235 NOMO1Q15155 1222 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 TEAD4Q15561 434 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 UGP2Q16851 508 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 SETMARQ53H47 684 aaPredicted RBP15.14■□□□□ 0.01
RNF4-210ENST00000508235 SLC45A4Q5BKX6 768 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 TRIM61Q5EBN2 209 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 SLC23A3Q6PIS1 610 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 PRR23CQ6ZRP0 262 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 HORMAD1Q86X24 394 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 SPOCK2Q92563 424 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 SKA1Q96BD8 255 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 ECHDC3Q96DC8 303 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 CARD9Q9H257 536 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 NOD2Q9HC29 1040 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 ATP8A1Q9Y2Q0 1164 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 SDK1Q7Z5N4 2213 aa15.14■□□□□ 0.01
RNF4-210ENST00000508235 ATXN2Q99700 1313 aaKnown RBP15.14■□□□□ 0.01
RNF4-210ENST00000508235 PI4KAP42356 2102 aa15.13■□□□□ 0.01
RNF4-210ENST00000508235 A0A1W2PQU0 124 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms