RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 COL1A2P08123 1366 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PHIPQ8WWQ0 1821 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 KIAA1217Q5T5P2 1943 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZCWPW2A0A1B0GU75 182 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TYW5A2RUC4 315 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TCAF2A6NFQ2 919 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 UNCXA6NJT0 531 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 C9IYK1 514 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 PSMD12O00232 456 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 EEF2KO00418 725 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TNPO2O14787 897 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 MRASO14807 208 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRIM24O15164 1050 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 MFSD11O43934 449 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 LZTS3O60299 673 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNAP91O60641 907 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 VPS4BO75351 444 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 RNASEH2AO75792 299 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ANXA9O76027 345 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 SORBS2O94875 1100 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 IL2RAP01589 272 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CD4P01730 458 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 RBP1P09455 135 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM163BP0C2L3 166 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 UMPSP11172 480 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 PORP16435 677 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 STMN1P16949 149 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 GOT1P17174 413 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 HOXB8P17481 243 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CYP2B6P20813 491 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CYP3A5P20815 502 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 MYF6P23409 242 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 PSMA4P25789 261 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CHRNA5P30532 468 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ARRB2P32121 409 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 NOS2P35228 1153 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 GALK1P51570 392 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TKTL1P51854 596 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 NAGLUP54802 743 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 HMGCS2P54868 508 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF280AP59817 542 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 RAB10P61026 200 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 NAA20P61599 178 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CRADDP78560 199 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 MPP1Q00013 466 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CDKL1Q00532 357 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CDC42EP1Q00587 391 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 MS4A2Q01362 244 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 POU4F1Q01851 419 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 FOXM1Q08050 763 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 NSUN2Q08J23 767 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 GALNT1Q10472 559 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 FSTL1Q12841 308 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 PEX6Q13608 980 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TUBA3CQ13748 450 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 FASTKQ14296 549 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 PCBP1Q15365 356 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 DGKDQ16760 1214 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM83EQ2M2I3 478 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 KIZQ2M2Z5 673 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF829Q3KNS6 432 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC10A6Q3KNW5 377 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 HSDL1Q3SXM5 330 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 AASDHQ4L235 1098 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 PCID2Q5JVF3 399 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 GNASQ5JWF2 1037 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 GLRA4Q5JXX5 417 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CELF3Q5SZQ8 465 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMTC4Q5T4D3 741 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 AGAP9Q5VTM2 703 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 IL23RQ5VWK5 629 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAP1SQ66K74 1059 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 REP15Q6BDI9 236 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 GRAMD4Q6IC98 578 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 LRRC8EQ6NSJ5 796 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM214Q6NUQ4 689 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 EFCAB12Q6NXP0 572 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 KLHL35Q6PF15 583 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAMDC4Q6UXC1 1216 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 NAPRTQ6XQN6 538 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 KIAA0408Q6ZU52 694 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CHSY3Q70JA7 882 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 FRA10AC1Q70Z53 315 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 FKBP9P1Q75LS8 142 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ARMCX2Q7L311 632 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ERMP1Q7Z2K6 904 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ACOT1Q86TX2 421 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZC3HC1Q86WB0 502 aaKnown RBP5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 HERC6Q8IVU3 1022 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CNTN4Q8IWV2 1026 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 ANKRD13AQ8IZ07 590 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 LILRA2Q8N149 483 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 SIX6OS1Q8N1H7 587 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CRYBG2Q8N1P7 616 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 LRRC71Q8N4P6 559 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCNYL1Q8N7R7 359 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 DDHD1Q8NEL9 900 aa5.01□□□□□ -1.61
HMGB3P16-201ENST00000508037 PPHLN1Q8NEY8 458 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms