RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
SNCAIP-209ENST00000508017 TRHDEQ9UKU6 1024 aa13.55□□□□□ -0.24
SNCAIP-209ENST00000508017 TDRKHQ9Y2W6 561 aaKnown RBP13.55□□□□□ -0.24
SNCAIP-209ENST00000508017 MRPL42Q9Y6G3 142 aaKnown RBP13.55□□□□□ -0.24
SNCAIP-209ENST00000508017 SAC3D1A6NKF1 404 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 MRASO14807 208 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 UBDO15205 165 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 FOXD2O60548 495 aaPredicted RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 IMPDH2P12268 514 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 NPR3P17342 541 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 UGT1A6P19224 532 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ATP6V1B2P21281 511 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 YWHAQP27348 245 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 SLC7A2P52569 658 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 MAP3K7CLP57077 242 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 PRKCQQ04759 706 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 SOX4Q06945 474 aaPredicted RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 GALNT2Q10471 571 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 CSHL1Q14406 222 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 SQLEQ14534 574 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 MARCH8Q5T0T0 291 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ARHGAP36Q6ZRI8 547 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 CLEC20AQ6ZU45 233 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 PIWIL4Q7Z3Z4 852 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 CLVS1Q8IUQ0 354 aaPredicted RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 CANT1Q8WVQ1 401 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 TOP1MTQ969P6 601 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ZNF419Q96HQ0 510 aaPredicted RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ULBP1Q9BZM6 244 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 CLK4Q9HAZ1 481 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 NSMCE4AQ9NXX6 385 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 RRN3Q9NYV6 651 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 HNRNPCP07910 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 SNRPB2P08579 225 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 TSPAN8P19075 237 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 GRIA3P42263 894 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 BAG6P46379 1132 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ARCN1P48444 511 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 TRAP1Q12931 704 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 RBM20Q5T481 1227 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 NAPEPLDQ6IQ20 393 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 PKN3Q6P5Z2 889 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 SLC27A1Q6PCB7 646 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 RBM12BQ8IXT5 1001 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 IPMKQ8NFU5 416 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 FNDC8Q8TC99 324 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 LRCH3Q96II8 777 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 MRPL57Q9BQC6 102 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 DCUN1D5Q9BTE7 237 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 FBRSL1Q9HCM7 1045 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 TMEM181Q9P2C4 612 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 RBPJLQ9UBG7 517 aa13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 FAF1Q9UNN5 650 aaPredicted RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 FNDC1Q4ZHG4 1894 aaPredicted RBP13.54□□□□□ -0.24
SNCAIP-209ENST00000508017 ATP6AP2A0A1C7CYW4 349 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 NCAM2O15394 837 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 AKAP10O43572 662 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ATP6AP2O75787 350 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 YBX3P16989 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ATP5F1P24539 256 aaPredicted RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 LRPAP1P30533 357 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 PLOD1Q02809 727 aaPredicted RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 CATSPER4Q7RTX7 472 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 GPRIN1Q7Z2K8 1008 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 CNTN4Q8IWV2 1026 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 DPF3Q92784 378 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 HNRNPABQ99729 332 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 C16orf70Q9BSU1 422 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 MEAF6Q9HAF1 191 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 SPON1Q9HCB6 807 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 IGSF5Q9NSI5 407 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 SMOXQ9NWM0 555 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 DDIT4Q9NX09 232 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 FBXW11Q9UKB1 542 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 CROTQ9UKG9 612 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 FAM149AA5PLN7 773 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 FAM155AB1AL88 458 aaPredicted RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 DLGAP1O14490 977 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 BMP10O95393 424 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ETFBP38117 255 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 PCID2Q5JVF3 399 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ZNF470Q6ECI4 717 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ELMSAN1Q6PJG2 1045 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 KDELC2Q7Z4H8 507 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 CUZD1Q86UP6 607 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms