RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 TIMP2P16035 220 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 FERP16591 822 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 TNFAIP3P21580 790 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 ABCG1P45844 678 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 DUSP3P51452 185 aaPredicted RBP16.05■□□□□ 0.16
SSBP2-207ENST00000507472 AIF1P55008 147 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 CYTH1Q15438 398 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 PARP15Q460N3 678 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 CDCP2Q5VXM1 449 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 LMX1AQ8TE12 382 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 FGF11Q92914 225 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 BBC3Q96PG8 261 aaPredicted RBP16.05■□□□□ 0.16
SSBP2-207ENST00000507472 ABCG4Q9H172 646 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 USP29Q9HBJ7 922 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 PCDHB1Q9Y5F3 818 aa16.05■□□□□ 0.16
SSBP2-207ENST00000507472 TMCO5BA8MYB1 307 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 TEX33O43247 280 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 AQP9O43315 295 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 TM7SF2O76062 418 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 GP1BAP07359 652 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 THOP1P52888 689 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 MAMLD1Q13495 774 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 DEFB133Q30KQ1 61 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 ZCCHC8Q6NZY4 707 aaKnown RBP16.04■□□□□ 0.16
SSBP2-207ENST00000507472 LRRC69Q6ZNQ3 347 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 RBFAQ8N0V3 343 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 AOPEPQ8N6M6 819 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 EXOC2Q96KP1 924 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 WRAP53Q9BUR4 548 aaKnown RBP16.04■□□□□ 0.16
SSBP2-207ENST00000507472 CPEB1Q9BZB8 566 aaKnown RBP16.04■□□□□ 0.16
SSBP2-207ENST00000507472 TCEAL2Q9H3H9 227 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-207ENST00000507472 MBNL1Q9NR56 388 aaKnown RBP16.04■□□□□ 0.16
SSBP2-207ENST00000507472 GPATCH2LQ9NWQ4 482 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 LHX3Q9UBR4 397 aa16.04■□□□□ 0.16
SSBP2-207ENST00000507472 PNMA8BQ9ULN7 279 aaPredicted RBP16.04■□□□□ 0.16
SSBP2-207ENST00000507472 CPED1A4D0V7 1026 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 J3KR12 359 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 FGF10O15520 208 aaPredicted RBP16.03■□□□□ 0.16
SSBP2-207ENST00000507472 RRP8O43159 456 aaKnown RBP16.03■□□□□ 0.16
SSBP2-207ENST00000507472 GCATO75600 419 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 IGFALSP35858 605 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 TPI1P60174 286 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 C1orf61Q13536 156 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 PTK2BQ14289 1009 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 CDKN3Q16667 212 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 KLHL40Q2TBA0 621 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 SNIP1Q8TAD8 396 aaKnown RBP16.03■□□□□ 0.16
SSBP2-207ENST00000507472 IFI44Q8TCB0 444 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 CXorf40AQ8TE69 158 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 BTN2A2Q8WVV5 523 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 VCPIP1Q96JH7 1222 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 IL12RB2Q99665 862 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 C1QTNF7Q9BXJ2 289 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 LRRC19Q9H756 370 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 EVA1BQ9NVM1 165 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 SPASTQ9UBP0 616 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 UBA2Q9UBT2 640 aaPredicted RBP16.03■□□□□ 0.16
SSBP2-207ENST00000507472 RAI2Q9Y5P3 530 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 MGAQ8IWI9 3026 aa16.03■□□□□ 0.16
SSBP2-207ENST00000507472 GOLGA6L22H0YM25 854 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 TPP1O14773 563 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 CSO75390 466 aaKnown RBP16.02■□□□□ 0.16
SSBP2-207ENST00000507472 PIGNO95427 931 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 MPOP05164 745 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 DESP17661 470 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 ACTN2P35609 894 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 EIF4A3P38919 411 aaKnown RBP16.02■□□□□ 0.16
SSBP2-207ENST00000507472 NDST2P52849 883 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 YPEL5P62699 121 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 TYRO3Q06418 890 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 ACAP1Q15027 740 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 CA9Q16790 459 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 TBC1D25Q3MII6 688 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 TMEM52BQ4KMG9 183 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 PRRT3Q5FWE3 981 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 CCDC183Q5T5S1 534 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 GUSBP11Q6P575 273 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 DNAAF5Q86Y56 855 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 PHACTR4Q8IZ21 702 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 TP53I13Q8NBR0 393 aaPredicted RBP16.02■□□□□ 0.16
SSBP2-207ENST00000507472 MAPK15Q8TD08 544 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 CELF6Q96J87 481 aaKnown RBP16.02■□□□□ 0.16
SSBP2-207ENST00000507472 DEPDC7Q96QD5 511 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 NCAPGQ9BPX3 1015 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 SLC39A8Q9C0K1 460 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 SUV39H2Q9H5I1 410 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.16
SSBP2-207ENST00000507472 PDFQ9HBH1 243 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.16
SSBP2-207ENST00000507472 PARVAQ9NVD7 372 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 DONSONQ9NYP3 566 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 NCKIPSDQ9NZQ3 722 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 SALL4Q9UJQ4 1053 aa16.02■□□□□ 0.16
SSBP2-207ENST00000507472 KALRNO60229 2985 aa16.02■□□□□ 0.15
SSBP2-207ENST00000507472 RP1P56715 2156 aa16.02■□□□□ 0.15
SSBP2-207ENST00000507472 ATMINO43313 823 aaPredicted RBP16.01■□□□□ 0.15
SSBP2-207ENST00000507472 BUB1BO60566 1050 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms