RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 SIRT4Q9Y6E7 314 aaPredicted RBP4.58□□□□□ -1.68
CALCOCO2-208ENST00000506971 RGPD5Q99666 1765 aa4.58□□□□□ -1.68
CALCOCO2-208ENST00000506971 CCDC171Q6TFL3 1326 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 PI4K2BG5E9Z4 385 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 H3BNC9 293 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 CCNT2O60583 730 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 COQ9O75208 318 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 CRYABP02511 175 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 TK1P04183 234 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 HNRNPA1P09651 372 aaKnown RBP eCLIP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 PSG1P11464 419 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 PORP16435 677 aaPredicted RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 CCR9P51686 369 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 WDR5P61964 334 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 GPS1Q13098 491 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 SLC12A1Q13621 1099 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 WTAPQ15007 396 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 ANKRD1Q15327 319 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 CNGA3Q16281 694 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 GRHL2Q6ISB3 625 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 CPLX2Q6PUV4 134 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 PRPF39Q86UA1 669 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 ADGRF4Q8IZF3 695 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 LINC01465Q8N7H1 131 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 CEP70Q8NHQ1 597 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 AFG1LQ8WV93 481 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 COQ8BQ96D53 544 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 TRMT61AQ96FX7 289 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 CNDP2Q96KP4 475 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 COG8Q96MW5 612 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 JAKMIP1Q96N16 626 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 TWNKQ96RR1 684 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 EDEM3Q9BZQ6 932 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 TSPY26PQ9H489 355 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 SYNCQ9H7C4 482 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 ECHDC1Q9NTX5 307 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 HMG20BQ9P0W2 317 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 SEL1LQ9UBV2 794 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 ADD3Q9UEY8 706 aaKnown RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 RGS17Q9UGC6 210 aaPredicted RBP4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 FZD4Q9ULV1 537 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 EXOC6BQ9Y2D4 811 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 NUP188Q5SRE5 1749 aa4.57□□□□□ -1.68
CALCOCO2-208ENST00000506971 C1orf167Q5SNV9 1468 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 MYH15Q9Y2K3 1946 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 TNS3Q68CZ2 1445 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 CPDO75976 1380 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 JCADQ9P266 1359 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ZMYM2Q9UBW7 1377 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 CACNA1IQ9P0X4 2223 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 NPHP3Q7Z494 1330 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 HMX3A6NHT5 357 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 GTPBP1O00178 669 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 CPLX1O14810 134 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 PIP5K1BO14986 540 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 INSIG1O15503 277 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ZSCAN9O15535 394 aaPredicted RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ASNA1O43681 348 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 TBCAO75347 108 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 SURF6O75683 361 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 SYF2O95926 243 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 CSF1P09603 554 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 CTSAP10619 480 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ATF7P17544 494 aaPredicted RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 MSNP26038 577 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 PSMA5P28066 241 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 KIF5BP33176 963 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 PBX1P40424 430 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 TNNT3P45378 269 aaPredicted RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 RAE1P78406 368 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 KRT24Q2M2I5 525 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 DNAJC21Q5F1R6 531 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 BEND3Q5T5X7 828 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 SNX30Q5VWJ9 437 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ISM2Q6H9L7 571 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 NFRKBQ6P4R8 1299 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ZNF530Q6P9A1 599 aaPredicted RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 CRTC1Q6UUV9 634 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 G2E3Q7L622 706 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 PPP1R42Q7Z4L9 355 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 SDCCAG8Q86SQ7 713 aaPredicted RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ZNF398Q8TD17 642 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 MAGEB5Q9BZ81 275 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 TWSG1Q9GZX9 223 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 C2orf40Q9H1Z8 148 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 TMEM45AQ9NWC5 275 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 RGL1Q9NZL6 768 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 PA2G4Q9UQ80 394 aaKnown RBP4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 KIF3AQ9Y496 699 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 PXDNQ92626 1479 aa4.56□□□□□ -1.68
CALCOCO2-208ENST00000506971 ABCA3Q99758 1704 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 ADCY9O60503 1353 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 ABCC12Q96J65 1359 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 PLCH1Q4KWH8 1693 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 LRP6O75581 1613 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 PNMA6EA0A0J9YXQ4 647 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 C17orf113A0A1B0GUU1 675 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 CD8B2A6NJW9 211 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 TTC34A8MYJ7 566 aa4.55□□□□□ -1.68
CALCOCO2-208ENST00000506971 GRM8O00222 908 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms