RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 A0A1W2PQM1 296 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 TCRBV5S1A1TA0A578 114 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 LMO7DNF2Z398 122 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 K7ENP7 123 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 FPGTO14772 594 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 TPP1O14773 563 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 NOBOXO60393 691 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 TMCC1O94876 653 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 GSRP00390 522 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 RHOQP17081 205 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 MMP8P22894 467 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 VAC14Q08AM6 782 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 IRF4Q15306 451 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 C6orf132Q5T0Z8 1188 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 INO80CQ6PI98 192 aaPredicted RBP13.55□□□□□ -0.24
DDX41-206ENST00000506965 CLEC14AQ86T13 490 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 KYQ8NBH2 561 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 FAM174AQ8TBP5 190 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 C11orf70Q9BRQ4 267 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 WRAP53Q9BUR4 548 aaKnown RBP13.55□□□□□ -0.24
DDX41-206ENST00000506965 PCDHGA8Q9Y5G5 932 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 RELNP78509 3460 aa13.55□□□□□ -0.24
DDX41-206ENST00000506965 GFPT2O94808 682 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 PIGNO95427 931 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 LSM8O95777 96 aaKnown RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 PRKCGP05129 697 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 PRKCSHP14314 528 aaPredicted RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 GM2AP17900 193 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 RFC1P35251 1148 aaPredicted RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 EIF4A3P38919 411 aaKnown RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 RGRP47804 291 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 JAM2P57087 298 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 RHDQ02161 417 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 CCDC15Q0P6D6 951 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 CYTH1Q15438 398 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 NR0B2Q15466 257 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 TGIF1Q15583 401 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 ALG11Q2TAA5 492 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 WSCD2Q2TBF2 565 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 MACC1Q6ZN28 852 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 TMPRSS9Q7Z410 1059 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 LSMEM2Q8N112 164 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 PELI3Q8N2H9 469 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 RYBPQ8N488 228 aaPredicted RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 EXD3Q8N9H8 876 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 MLKLQ8NB16 471 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 TSACCQ96A04 125 aaPredicted RBP13.54□□□□□ -0.24
DDX41-206ENST00000506965 RAB7BQ96AH8 199 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 HMCESQ96FZ2 354 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 EXOC2Q96KP1 924 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 EPAS1Q99814 870 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 ABCG4Q9H172 646 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 THSD1Q9NS62 852 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 NAV2Q8IVL1 2488 aa13.54□□□□□ -0.24
DDX41-206ENST00000506965 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 H3BM21 787 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 KDELR3O43731 214 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 PLEKP08567 350 aaPredicted RBP13.53□□□□□ -0.24
DDX41-206ENST00000506965 UNGP13051 313 aaPredicted RBP13.53□□□□□ -0.24
DDX41-206ENST00000506965 HGFP14210 728 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 WT1P19544 449 aaPredicted RBP13.53□□□□□ -0.24
DDX41-206ENST00000506965 PTPN9P43378 593 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 MAPKAPK2P49137 400 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 SNX16P57768 344 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 BPIFB4P59827 614 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 SGCGQ13326 291 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 HS1BP3Q53T59 392 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 TAF1BQ53T94 588 aaPredicted RBP13.53□□□□□ -0.24
DDX41-206ENST00000506965 RWDD4Q6NW29 188 aaKnown RBP13.53□□□□□ -0.24
DDX41-206ENST00000506965 FOXR1Q6PIV2 292 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 GDPD4Q6W3E5 623 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 PLA2G15Q8NCC3 412 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 PCDH19Q8TAB3 1148 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 COL26A1Q96A83 441 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 WBP1Q96G27 269 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 IL12RB2Q99665 862 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 DPH1Q9BZG8 443 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 FOXP3Q9BZS1 431 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 TTYH3Q9C0H2 523 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 MAGEH1Q9H213 219 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 PDFQ9HBH1 243 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 SPASTQ9UBP0 616 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 IPO11Q9UI26 975 aaKnown RBP13.53□□□□□ -0.24
DDX41-206ENST00000506965 PAXBP1Q9Y5B6 917 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
DDX41-206ENST00000506965 UBR5O95071 2799 aaPredicted RBP13.52□□□□□ -0.24
DDX41-206ENST00000506965 TSPAN11A1L157 253 aa13.52□□□□□ -0.25
DDX41-206ENST00000506965 J3QKU1 62 aa13.52□□□□□ -0.25
DDX41-206ENST00000506965 BUB1BO60566 1050 aaPredicted RBP13.52□□□□□ -0.25
DDX41-206ENST00000506965 RAMP2O60895 175 aa13.52□□□□□ -0.25
DDX41-206ENST00000506965 TNFSF15O95150 251 aa13.52□□□□□ -0.25
DDX41-206ENST00000506965 POP4O95707 220 aaKnown RBP13.52□□□□□ -0.25
DDX41-206ENST00000506965 UBE2HP62256 183 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms