RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 SPTLC3Q9NUV7 552 aa15.76■□□□□ 0.11
CLDND1-211ENST00000506575 ETNK2Q9NVF9 386 aa15.76■□□□□ 0.11
CLDND1-211ENST00000506575 RCOR3Q9P2K3 495 aaPredicted RBP15.76■□□□□ 0.11
CLDND1-211ENST00000506575 ITM2BQ9Y287 266 aa15.76■□□□□ 0.11
CLDND1-211ENST00000506575 ANKRD36A6QL64 1941 aa15.76■□□□□ 0.11
CLDND1-211ENST00000506575 SHROOM3Q8TF72 1996 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 IGLON5A6NGN9 336 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 A6NNZ2 444 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 TMEM110-MUSTN1A8MSY1 372 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 KRT7P08729 469 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 EPHA8P29322 1005 aaPredicted RBP15.75■□□□□ 0.11
CLDND1-211ENST00000506575 SERPINA4P29622 427 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 CSNK1DP48730 415 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 SUOXP51687 545 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 CLDN2P57739 230 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 ELP6Q0PNE2 266 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 ZNF235Q14590 738 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 LBRQ14739 615 aaKnown RBP15.75■□□□□ 0.11
CLDND1-211ENST00000506575 LRRC73Q5JTD7 316 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 ZFYVE27Q5T4F4 411 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 GCNT7Q6ZNI0 430 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 PTAR1Q7Z6K3 402 aaPredicted RBP15.75■□□□□ 0.11
CLDND1-211ENST00000506575 GLRX5Q86SX6 157 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 SRLQ86TD4 932 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 MAP7D3Q8IWC1 876 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 BBS5Q8N3I7 341 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 ATPAF2Q8N5M1 289 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 KCTD6Q8NC69 237 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 OR13H1Q8NG92 308 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 BAHD1Q8TBE0 780 aaPredicted RBP15.75■□□□□ 0.11
CLDND1-211ENST00000506575 HCAR2Q8TDS4 363 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 CXorf40AQ8TE69 158 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 NSMCE1Q8WV22 266 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 VOPP1Q96AW1 172 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 ZNF641Q96N77 438 aaPredicted RBP15.75■□□□□ 0.11
CLDND1-211ENST00000506575 CNTNAP3BQ96NU0 1288 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 ANP32EQ9BTT0 268 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 C1QTNF2Q9BXJ5 285 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 CNTNAP3Q9BZ76 1288 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 SUV39H2Q9H5I1 410 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 SEPT3Q9UH03 358 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 GGT7Q9UJ14 662 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 HS3ST3A1Q9Y663 406 aa15.75■□□□□ 0.11
CLDND1-211ENST00000506575 EPG5Q9HCE0 2579 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 FPGTO14772 594 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 AREL1O15033 823 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 HYAL3O43820 417 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-211ENST00000506575 TIMP2P16035 220 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 MAN1A1P33908 653 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 RXRGP48443 463 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 BCL2L1Q07817 233 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 NSUN2Q08J23 767 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLDND1-211ENST00000506575 TBX2Q13207 712 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-211ENST00000506575 MESDQ14696 234 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 PDK2Q15119 407 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 SHBQ15464 509 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 ERAP2Q6P179 960 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 BRAT1Q6PJG6 821 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 ABI3BPQ7Z7G0 1075 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 DCP2Q8IU60 420 aaKnown RBP15.74■□□□□ 0.11
CLDND1-211ENST00000506575 TP53INP2Q8IXH6 220 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 RHOT2Q8IXI1 618 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 SLC35G2Q8TBE7 412 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 SAP25Q8TEE9 199 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 ASB12Q8WXK4 309 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 TSC1Q92574 1164 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 LENG8Q96PV6 779 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-211ENST00000506575 SCNM1Q9BWG6 230 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 C1QTNF7Q9BXJ2 289 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 FTSJ1Q9UET6 329 aa15.74■□□□□ 0.11
CLDND1-211ENST00000506575 GOLGA8CPA6NN73 597 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 SPINT1O43278 529 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 TNFSF14O43557 240 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 BUB1BO60566 1050 aaPredicted RBP15.73■□□□□ 0.11
CLDND1-211ENST00000506575 MMP20O60882 483 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 TM7SF2O76062 418 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 TOP3BO95985 862 aaKnown RBP15.73■□□□□ 0.11
CLDND1-211ENST00000506575 CD48P09326 243 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 SPINK2P20155 84 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 HSPA9P38646 679 aaKnown RBP15.73■□□□□ 0.11
CLDND1-211ENST00000506575 RGRP47804 291 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 SCNN1BP51168 640 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 BNIP3Q12983 259 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 MMRN1Q13201 1228 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 DPYSL3Q14195 570 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 FGL2Q14314 439 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 UGP2Q16851 508 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 ATP13A4Q4VNC1 1196 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 KYAT3Q6YP21 454 aaKnown RBP15.73■□□□□ 0.11
CLDND1-211ENST00000506575 Q6ZSR6 202 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 CAMK1DQ8IU85 385 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 CHCHD4Q8N4Q1 142 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 PNPLA1Q8N8W4 532 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 DENND6BQ8NEG7 585 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 FAM71BQ8TC56 605 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 PSKH2Q96QS6 385 aa15.73■□□□□ 0.11
CLDND1-211ENST00000506575 WRAP53Q9BUR4 548 aaKnown RBP15.73■□□□□ 0.11
CLDND1-211ENST00000506575 MAP1BP46821 2468 aaKnown RBP15.73■□□□□ 0.11
CLDND1-211ENST00000506575 TDRD6O60522 2096 aaKnown RBP15.72■□□□□ 0.11
CLDND1-211ENST00000506575 TSPAN11A1L157 253 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms