RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TM9SF3Q9HD45 589 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 DKK3Q9UBP4 350 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 SLC6A14Q9UN76 642 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 ZFR2Q9UPR6 939 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 ITM2BQ9Y287 266 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 A0A1W2PQU0 124 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 WNT9AO14904 365 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 MATN3O15232 486 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 AP1G1O43747 822 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 GNSP15586 552 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 TIMP2P16035 220 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 PECAM1P16284 738 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 ZFXP17010 805 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 ENGP17813 658 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 MX2P20592 715 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 CCNCP24863 283 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 HSPA9P38646 679 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 SCNN1BP51168 640 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 RENBPP51606 427 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 BNC1Q01954 994 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 PPIDQ08752 370 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 CCDC15Q0P6D6 951 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 TMEM259Q4ZIN3 620 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 TFDP3Q5H9I0 405 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 SEL1L3Q68CR1 1132 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 CCDC50Q8IVM0 306 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 RCOR2Q8IZ40 523 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 NSMCE1Q8WV22 266 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 RBM41Q96IZ5 413 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 ZNF830Q96NB3 372 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 NUSAP1Q9BXS6 441 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 SUV39H2Q9H5I1 410 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 NT5MQ9NPB1 228 aa18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 SAE1Q9UBE0 346 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 PACSIN2Q9UNF0 486 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDLIM7-216ENST00000506537 CCDC66A2RUB6 948 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 AREL1O15033 823 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 CST8O60676 142 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 FTCDO95954 541 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 ITIH2P19823 946 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 CSNK1EP49674 416 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 AP1S1P61966 158 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 HNRNPDQ14103 355 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 GRM3Q14832 879 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 PPP2R5EQ16537 467 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 ZNF284Q2VY69 593 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 FAM182AQ5T1J6 154 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 TIGD7Q6NT04 549 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 NEK5Q6P3R8 708 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 HORMAD1Q86X24 394 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 CCDC13Q8IYE1 715 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 CCNYQ8ND76 341 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 KLK6Q92876 244 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 ECHDC3Q96DC8 303 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 ZNF641Q96N77 438 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 NUDCD1Q96RS6 583 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 TSGA10Q9BZW7 698 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 ATP13A3Q9H7F0 1226 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 NOD2Q9HC29 1040 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 GUCA1BQ9UMX6 200 aa18.43■□□□□ 0.54
PDLIM7-216ENST00000506537 PRR5-ARHGAP8B1AHC4 643 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 TRAFD1O14545 582 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 CDX4O14627 284 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 PCDH8O95206 1070 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 HLA-DQB2P05538 268 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 CCNB1P14635 433 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 PRLRP16471 622 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 SERPINA4P29622 427 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 AFF3P51826 1226 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 ARHGAP8P85298 464 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 GRIK2Q13002 908 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 ZBTB17Q13105 803 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 TFDP2Q14188 446 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 IHHQ14623 411 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 RSPO4Q2I0M5 234 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 ALG1LQ6GMV1 187 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 AADACL2Q6P093 401 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 B4GALNT4Q76KP1 1039 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 PEX26Q7Z412 305 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 BBS5Q8N3I7 341 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 RNF10Q8N5U6 811 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 OR2I1PQ8NGU4 316 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 NETO1Q8TDF5 533 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 RAB7BQ96AH8 199 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 RMDN1Q96DB5 314 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 HEMGNQ9BXL5 484 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 AMFRQ9UKV5 643 aa18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 TPX2Q9ULW0 747 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-216ENST00000506537 TP53BP1Q12888 1972 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 A0A1B0GVT2 93 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 UPK3BL1B0FP48 263 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 UPK3BL2E5RIL1 263 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 KCNK1O00180 336 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 ARHGAP33O14559 1287 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 DDX3YO15523 660 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 KRT86O43790 486 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 WNT1P04628 370 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 PRKCGP05129 697 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms