RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 NTSR1P30989 418 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CD86P42081 329 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 IL12RB1P42701 662 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 MAGEA3P43357 314 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CARSP49589 748 aaKnown RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 VPS41P49754 854 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 SCNN1BP51168 640 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CCNHP51946 323 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 BASP1P80723 227 aaKnown RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 RAD51Q06609 339 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 ITKQ08881 620 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CALCOCO2Q13137 446 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 FZD5Q13467 585 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CAMK2GQ13555 558 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 NAA30Q147X3 362 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 KCTD19Q17RG1 926 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 MYLK3Q32MK0 819 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 ACCSLQ4AC99 568 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 FNDC3BQ53EP0 1204 aaKnown RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 ATXN7L2Q5T6C5 722 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 C9orf64Q5T6V5 341 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 FAXCQ5TGI0 409 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 EMC10Q5UCC4 262 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 ANKRD22Q5VYY1 191 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 NAPEPLDQ6IQ20 393 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 RANBP10Q6VN20 620 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CCNI2Q6ZMN8 369 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 DPY19L3Q6ZPD9 716 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 Q6ZVU0 165 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 ZNF534Q76KX8 674 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 TRMT11Q7Z4G4 463 aaKnown RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 LINC00523Q86TU6 105 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 PDCD7Q8N8D1 485 aaKnown RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 IL17RCQ8NAC3 791 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 FBXO25Q8TCJ0 367 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 HCAR2Q8TDS4 363 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 PRCCQ92733 491 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 ECHDC3Q96DC8 303 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 FEM1CQ96JP0 617 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 MRGPRX2Q96LB1 330 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 TRIB3Q96RU7 358 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 FAM129BQ96TA1 746 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 NELL2Q99435 816 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 GABRG3Q99928 467 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 HEPHQ9BQS7 1158 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 PARD6BQ9BYG5 372 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 OSBPL6Q9BZF3 934 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 TM6SF2Q9BZW4 377 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 TRIM31Q9BZY9 425 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 PHACTR1Q9C0D0 580 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 EPC1Q9H2F5 836 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 TNKS2Q9H2K2 1166 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 LRRC40Q9H9A6 602 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 FBRSQ9HAH7 460 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 NOD2Q9HC29 1040 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CD248Q9HCU0 757 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 ARHGEF3Q9NR81 526 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 HECAQ9UBI9 543 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 EVLQ9UI08 416 aaPredicted RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 ANAPC5Q9UJX4 755 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 CA14Q9ULX7 337 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 MRPS17Q9Y2R5 130 aaKnown RBP7.28□□□□□ -1.24
NUP54-204ENST00000506098 PPIL1Q9Y3C6 166 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 STON1Q9Y6Q2 735 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 WASF2Q9Y6W5 498 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 LRP4O75096 1905 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 PCM1Q15154 2024 aa7.28□□□□□ -1.24
NUP54-204ENST00000506098 A0A1W2PQ67 120 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 ESYT3A0FGR9 886 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 TSPAN11A1L157 253 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 TTC24A2A3L6 582 aaPredicted RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 CHURC1-FNTBB4DL54 471 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 E7ESA3 106 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 E7EVH7 732 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 GJB3O75712 270 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 TMEM63AO94886 807 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 CA4P22748 312 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 PRKCHP24723 683 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 TIE1P35590 1138 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 RECQLP46063 649 aaPredicted RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 PLTPP55058 493 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 WNT3AP56704 352 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 RPL26P61254 145 aaKnown RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 VSNL1P62760 191 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 SARNPP82979 210 aaKnown RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 ZXDAP98168 799 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 CDK18Q07002 472 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 BCL2L1Q07817 233 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 MSLNQ13421 630 aaPredicted RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 TJAP1Q5JTD0 557 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 ARMC3Q5W041 872 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 DENND5AQ6IQ26 1287 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 LRRC8BQ6P9F7 803 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 SERPINA13PQ6UXR4 307 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 PPP1R21Q6ZMI0 780 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 CAND1Q86VP6 1230 aaKnown RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 ZCCHC9Q8N567 271 aaKnown RBP7.27□□□□□ -1.25
NUP54-204ENST00000506098 TMIEQ8NEW7 156 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 RNF217Q8TC41 542 aa7.27□□□□□ -1.25
NUP54-204ENST00000506098 OR8D1Q8WZ84 308 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms