RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 FADS3Q9Y5Q0 445 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PHF3Q92576 2039 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 DNAJC13O75165 2243 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 IGLON5A6NGN9 336 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 A6NL46 340 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 FAM171A2A8MVW0 826 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 C21orf140B9A014 251 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 C1QTNF3-AMACRE9PGA6 284 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 FPGTO14772 594 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PPM1DO15297 605 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PHF1O43189 567 aaPredicted RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 DTNBO60941 627 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 JRKO75564 520 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 WISP2O76076 250 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PCDH8O95206 1070 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 KIF20AO95235 890 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TIAF1O95411 115 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 LATS1O95835 1130 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 CST3P01034 146 aaPredicted RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 KRT19P08727 400 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TYRP1P17643 537 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ALDH4A1P30038 563 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PDIA3P30101 505 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SPAM1P38567 509 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 CCT6AP40227 531 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 GARSP41250 739 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TSFMP43897 325 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 GPR3P46089 330 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PSEN1P49768 467 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF131P52739 623 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 NDST1P52848 882 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SMTNP53814 917 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SLC12A3P55017 1021 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 YPEL5P62699 121 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 CCT2P78371 535 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 GTF2BQ00403 316 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TFF3Q07654 80 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ARHGEF7Q14155 803 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 LBRQ14739 615 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ASIC2Q16515 512 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 EFHC1Q5JVL4 640 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 FAM69BQ5VUD6 431 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 HMBOX1Q6NT76 420 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM71Q6P5X7 295 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 NCCRP1Q6ZVX7 275 aaPredicted RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ERN2Q76MJ5 926 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SYVN1Q86TM6 617 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM200AQ86VY9 491 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 GKN2Q86XP6 184 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 HID1Q8IV36 788 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TP53I13Q8NBR0 393 aaPredicted RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 FAM46DQ8NEK8 389 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 OR52K2Q8NGK3 314 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 OR2A12Q8NGT7 310 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SLC2A14Q8TDB8 520 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PATE1Q8WXA2 126 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 RUFY2Q8WXA3 655 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SCG3Q8WXD2 468 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 BRF1Q92994 677 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TRAPPC9Q96Q05 1148 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TIPINQ9BVW5 301 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 HDAC8Q9BY41 377 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 IRX2Q9BZI1 471 aaPredicted RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ULBP3Q9BZM4 244 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ILKAPQ9H0C8 392 aaPredicted RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 XYLT2Q9H1B5 865 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF552Q9H707 407 aaPredicted RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PDE11AQ9HCR9 933 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 PDE7BQ9NP56 450 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 LHX9Q9NQ69 397 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 MBNL1Q9NR56 388 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 FOXD4L1Q9NU39 408 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SPATS2LQ9NUQ6 558 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 INTS13Q9NVM9 706 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM63CQ9P1W3 806 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 SUCOQ9UBS9 1254 aaKnown RBP3.39□□□□□ -1.87
TCOF1-208ENST00000506063 HMGXB4Q9UGU5 601 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 DOLKQ9UPQ8 538 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 ST14Q9Y5Y6 855 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 DGKBQ9Y6T7 804 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 CPAMD8Q8IZJ3 1885 aa3.39□□□□□ -1.87
TCOF1-208ENST00000506063 TRGV8A0A0C4DH27 118 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 A8MXQ7 604 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 B4DGG1 531 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 M0QYT0 321 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 POLR1CO15160 346 aaPredicted RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 AP1G1O43747 822 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF821O75541 412 aaPredicted RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CTAG2O75638 210 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 KIAA0754O94854 1291 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM63AO94886 807 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SLCO2B1O94956 709 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 RASGRP1O95267 797 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 FGF1P05230 155 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SLFN14P0C7P3 912 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 ADRB3P13945 408 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 GARTP22102 1010 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 PTPN4P29074 926 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CASP14P31944 242 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CHRNA3P32297 505 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms